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revision 1.1211 by jmc, Mon Dec 28 02:46:20 2009 UTC revision 1.1217 by jmc, Fri Jan 15 00:59:33 2010 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/diagnostics:
8      - add optional level number diagnostics (i.e., level number to be define
9        explictly with S/R DIAGNOSTICS_SETKLEV) with parser-code(10)="X".
10      - strictly check for valid parser-code(10) ;
11      - check if adding diag to the list from the right place.
12    o pkg/longstep:
13      - change parameters and fix tracer conservation with rstar/nonlinear free surface
14    o diagnostics:
15     - in all pkgs, replace remaining calls to old S/R DIAGNOSTICS_ADD2LIST with newer
16       S/R DIAGNOSTICS_ADDTOLIST ; fix seaice VICE diagnostics.
17    o pkg/diagnostics:
18     - Add option for writing vertical integral (sum of selected levels) of an output
19        field instead of writing output field levels. Activate this option on a per
20        output-file basis, by setting the 2nd character of fileflag to 'I'.
21     - Add field-specific information relative to level integral in 3rd postion
22        of parser diagnostics code (gdiag): " "=cumulate levels, "R"=integrate
23        vertically (x level-thickness x hFac), "r"=same but without hFac.
24    o do_the_model_io:
25      - pass end-of-model-run flag as argument, from forward_step to diagnostics_write:
26        in case useSIGREG, will write (averaged) diagnostics (if dumpAtLast) before
27        writing pickups and stopping.
28    o pkg/diagnostics (for now, only with mdsio):
29      - write time information to meta file (and modify accordingly rdmds.m) :
30        time-averaged diagnostics output: write starting and ending time of the
31        time-averaging interval ; snap-shot diagnostics output remains unchanged;
32    o pkg/timeave:
33      - S/R TIMEAVE_NORMALIZ: change size of cumulated-time array (was previously
34        always Nr), now assumed to be equal to number of levels of averaged field;
35        only used for DIC_COST monthly mean arrays: this fixes dic_aver_final.F
36    o pkg/sbo:
37      - fix ocean bottom pressure global-average & 2-D time-ave output (was
38        neither initialised nor filled).
39      - add starting iteration in suffix of global-average output file
40        (to avoid over-writing the file after a restart)
41      - use standard MDSIO pkg S/R instead of SBO_WRITEVECTOR (fix byte-swap Pb).
42    o time-average:
43      - use simple cumulative-time array (no k index) in all pkgs: {PKG}_timeAve(bi,bj)
44        (pkgs: aim_v23, bulk_force, dic, gmredi, kpp, land, ocn_compon_interf,
45         ggl90, my82, opps, pp81, ptracers, sbo, seaice, shelfice, thsice)
46        this fix DIC_COST cumulative-time array (previously: bi,bj,k)
47      - fix 1rst call (nIter0) snap-shot output and accumulation (pkg/shelfice)
48      - fix missing accumulation for pkg/opps.
49      - cumulate fields only if doing time-ave output ({PKG}_taveFreq > 0)
50         (pkgs: ptracers, kpp, ocn_compon_interf, ggl90, my82, pp81);
51      - fix initialisation of time-ave vars and do only full time-step increment
52        (i.e.: no first & last "half time-step") (pkgs: ggl90, my82, opps, pp81);
53  o pkg/layers:  o pkg/layers:
54    - use standard RW pkg S/R to write the output    - use standard RW pkg S/R to write the output
55      and remove local write_fld version (which had a problem).      and remove local write_fld version (which had a problem).

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