4 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
5 |
============================== |
============================== |
6 |
|
|
7 |
|
o take bi,bj loops outside calc_gw to fix Pb with local array KappaRU,V |
8 |
|
o commit code to make SST/SSS weights spatially variable |
9 |
|
(based on either variable in-situ or variable initial T/S weights) |
10 |
|
o commit code to relax deviations of xx_theta, xx_salt to 5*sigma, |
11 |
|
now based on horizontally varying weights wthetaLev, wsaltLev |
12 |
|
|
13 |
|
checkpoint58k_post |
14 |
|
o testreport: |
15 |
|
- always build in dir. "build" (if not there, mkdir build instead of building |
16 |
|
& running in input) |
17 |
|
- run in dir run (if it exists), in build otherwise. |
18 |
|
- call prepare_run (if input/prepare_run exists) |
19 |
|
- run multi-threaded test (with new option: "-mth") if file input/eedata.mth exists. |
20 |
|
o pkg/exf modifications to interpolation and rotation routines for more |
21 |
|
reasonable treatment of North Pole singularity: for tracers North Pole |
22 |
|
value is set to northernmost zonal-mean value, for zonal velocity it is |
23 |
|
set to zero, and for meridional velocity it is set to northernmost value. |
24 |
|
o pkg/exf/exf_check_range.F |
25 |
|
- add tile index to diagnostics and move stop statement to the very |
26 |
|
end of the routine. |
27 |
|
o pkg/diagnostics: (diagnostics_main_init.F) |
28 |
|
define title of isomorphic variables according to the current config. |
29 |
|
o pkg/thsice with pkg/seaice dynamics: |
30 |
|
- fix domain of computation (interior only, required for exf) and do exchanges |
31 |
|
- seaice-dynamics forcing: add atmospheric and seaice loading to SSH gradient |
32 |
|
o towards a standard way of dealing with multi-threading in MONITOR |
33 |
|
and ${PKG}_MONITOR (all except ptracers_monitor) subroutines. |
34 |
|
o Pass variable viscosities (vertical and horizontal, e.g., KPP or Leith) |
35 |
|
to W momentum equation in nonhydrostatic and quasihydrostatic runs. |
36 |
|
o make exf_monitor & seaice_monitor independant of the main (dynamics) monitor. |
37 |
|
o pkg/seaice: fix SEAICEuseEVPpickup parameter (put it in a commom block) |
38 |
|
o generic_advdiff: DST advection S/R : use local copy of velocity to compute CFL |
39 |
|
(problems ? with gradient check in bottom_ctrl_5x5 adjoint test) |
40 |
|
o tracer advection: |
41 |
|
- clean-up and simplify calc_common_factors.F |
42 |
|
- make a local copy of velocity and pass it (as u,v,r_Trans) to DST tracer |
43 |
|
advection subroutine (but still not used within DST advection S/R) |
44 |
|
o rename pkg aim_ocn_coupler to atm_ocn_coupler (later on, will be used without aim) |
45 |
|
|
46 |
|
checkpoint58j_post |
47 |
|
o new driver S/R: LOAD_FIELDS_DRIVER to load external forcing fields |
48 |
|
from file (collects calls previously in FORWARD_STEP) |
49 |
|
o move call to SEAICE_MODEL from FORWARD_STEP to DO_OCEANIC_PHYS |
50 |
|
o adjoint store dir. adjusted accordingly |
51 |
|
o genmake2 |
52 |
|
replace target "ad_taf" by $(EXE_AD) ; add $(EXE_AD) to the make CLEAN list. |
53 |
|
|
54 |
|
checkpoint58i_post |
55 |
|
o pkg/seaice: add parameter that allows to scale/turn off effect of seaice |
56 |
|
on wind stress (SEAICEstressFactor defaults to 1.) |
57 |
|
o Total number of Timers is finite (<=40): comment out 2 non-essential one |
58 |
|
in the_main_loop.F to avoid Pb (e.g., when running fizhi test) |
59 |
|
o vector_invariant: fix highOrderVorticity(=4.th.Order) advection |
60 |
|
on CS-grid: no longer loosing mass. |
61 |
|
o exf & curvilinear-grid: no longer modify longitude xC & xG. |
62 |
|
o pkg/ggl90: fix sloppy output and fix a bug |
63 |
|
o pkg/seaice: added SEAICEuseEVPpickup parameter |
64 |
|
- Set to false in order to start EVP solver with |
65 |
|
non-EVP pickup files when using SEAICEuseEVP |
66 |
|
- fix sign error in diffusion in seaice_calc_rhs |
67 |
|
|
68 |
|
checkpoint58h_post |
69 |
|
* Modifications for bottom topography control |
70 |
|
o replace hFacC by _hFacC at various places |
71 |
|
o replace ALLOW_HFACC_CONTROL by ALLOW_DEPTH_CONTROL |
72 |
|
o add non-self-adjoint cg2d_nsa |
73 |
|
o update autodiff support routines |
74 |
|
o re-initialise hfac after ctrl_depth_ini |
75 |
|
o works for 5x5 box, doesnt work for global_ocean.90x40x15 |
76 |
|
* Adding verification for 5x5 box (4-layer) bottom topography control |
77 |
|
|
78 |
|
checkpoint58g_post |
79 |
|
o pkg/diagnostics: implement "periodic averaging diagnostics" (e.g., |
80 |
|
used for mean seasonal cycle, mean diurnal cycle); add an example |
81 |
|
in verification/global_ocean.cs32x15/input.thsice/data.diagnostics |
82 |
|
o pkg/ggl90: |
83 |
|
- add parameter (minimum surface kinetic energy) |
84 |
|
- fix bug (avoiding division by zero) |
85 |
|
o couple pkg/thsice to pkg/seaice: |
86 |
|
- modify advection in seaice to accomodate new scalar fields to be advected |
87 |
|
- only muliDimAdection scheme work with seaice/thsice |
88 |
|
- mapping of thsice-variables to seaice-variables, back and forth |
89 |
|
- does not break the verification experiments, but does not give the |
90 |
|
desired results either |
91 |
|
o pkg/seaice |
92 |
|
- make (default) second order advection a bit less confusing? |
93 |
|
|
94 |
|
checkpoint58f_post |
95 |
|
o couple pkg/thsice and pkg/exf (as a preparation for coupling pkg/thsice |
96 |
|
to pkg/seaice): |
97 |
|
- new routines thsice_map_exf and thsice_get_exf provide the interface |
98 |
|
- add an additional formal parameter to thsice_solve4temp |
99 |
|
o pkg/exf: |
100 |
|
- add new fields wspeed, snowprecip (to be able to couple to thsice) |
101 |
|
- correct Stefan-Boltzmann constant |
102 |
|
- new parameter for longwave surface emittance |
103 |
|
- separate some stuff from exf_bulkformulae into new routines |
104 |
|
exf_radiation, exf_wind |
105 |
|
- add new parameters and constants: longwave emissivity for ocean, ice |
106 |
|
and snow, evaporation parameters over ice |
107 |
|
- decouple wind/stress computation from ALLOW_BULKFORMULA: always compute |
108 |
|
either wind from stress or stress from wind |
109 |
|
o pkg/thSIce: |
110 |
|
- split thsice_step_fwd.F in 2 S/R: thsice_step_temp.F & thsice_step_fwd.F |
111 |
|
- put i,j loops inside S/R: THSICE_ALBEDO, THSICE_SOLVE4TEMP, THSICE_EXTEND |
112 |
|
and THSICE_CALC_THICKN |
113 |
|
- for now, call to THSICE_GET_BULKF remains inside i,j loops. |
114 |
|
- add CPP option: ALLOW_DBUG_THSICE and header file THSICE_DEBUG.h |
115 |
|
to make debugging easier. |
116 |
|
- affects results (@ truncation level) of global_ocean.cs32x15.thsice: update output |
117 |
|
o pkg/bulk_force: |
118 |
|
- clean-up comments and parameters ; |
119 |
|
- add new Bulk-Formulae from Large and Yeager, 2004, NCAR/TN-460+STR ; |
120 |
|
o fix bug in aim+thsice albedo: snow & ice thickness arguments were switched; |
121 |
|
generate new output for test-experiment: aim.5l_cs.thSI |
122 |
|
o results_ad : rename "output.txt_adm" to "output_adm.txt" and change |
123 |
|
testreport accordingly |
124 |
|
|
125 |
|
checkpoint58e_post |
126 |
|
o SEAICE_CGRID adjoint done |
127 |
|
o R_STAR adjoint implemented. |
128 |
|
* Seems to just work (based on global_ocean.90x40x15/code_ad_nlfs/ ) |
129 |
|
* need to sort out init. of h0facc, etc. |
130 |
|
o Make pkg/profile fully independent of ecco,cost, etc. stuff |
131 |
|
to be able to use it in pure forward. |
132 |
|
|
133 |
checkpoint58d_post |
checkpoint58d_post |
134 |
o upgrade simple test-experiment to tutorial example: |
o upgrade simple test-experiment to tutorial example: |
135 |
step.1: duplicate the experiment and (step.2) will remove the old copy. |
step.1: duplicate the experiment and (step.2) will remove the old copy. |