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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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o add 3 "_d 0"s so that fizhi compiles with xlf on iblade, and replace |
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two " &end" by " &" (in fizhi-cs-*) because S/R NML_SET_TERMINATOR |
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cannot deal with the former |
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o cleaning: |
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- remove unused S/R (MDSWRITEMETA, DIAGNOSTICS_ADD2LIST, old DFILE IO S/R) |
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- comment out maskH definition (replaced by maskInC) |
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o pkg/monitor: |
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- change mon_printstats_rl.F & mon_stats_rl.F (were similar to mon_writestats_rl |
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& mon_calc_stats_rl) to be the RL pendant to mon_printstats_rs & mon_stats_rs. |
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checkpoint62a (2010/01/15) |
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o model/src: |
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- bottom pressure diagnostic: correct for r* (when nonlinFreeSurf >= 4) |
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o pkg/diagnostics: |
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- add optional level number diagnostics (i.e., level number to be define |
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explictly with S/R DIAGNOSTICS_SETKLEV) with parser-code(10)="X". |
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- strictly check for valid parser-code(10) ; |
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- check if adding diag to the list from the right place. |
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o pkg/longstep: |
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- change parameters and fix tracer conservation with rstar/nonlinear free surface |
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o diagnostics: |
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- in all pkgs, replace remaining calls to old S/R DIAGNOSTICS_ADD2LIST with newer |
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S/R DIAGNOSTICS_ADDTOLIST ; fix seaice VICE diagnostics. |
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o pkg/diagnostics: |
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- Add option for writing vertical integral (sum of selected levels) of an output |
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field instead of writing output field levels. Activate this option on a per |
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output-file basis, by setting the 2nd character of fileflag to 'I'. |
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- Add field-specific information relative to level integral in 3rd postion |
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of parser diagnostics code (gdiag): " "=cumulate levels, "R"=integrate |
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vertically (x level-thickness x hFac), "r"=same but without hFac. |
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o do_the_model_io: |
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- pass end-of-model-run flag as argument, from forward_step to diagnostics_write: |
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in case useSIGREG, will write (averaged) diagnostics (if dumpAtLast) before |
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writing pickups and stopping. |
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o pkg/diagnostics (for now, only with mdsio): |
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- write time information to meta file (and modify accordingly rdmds.m) : |
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time-averaged diagnostics output: write starting and ending time of the |
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time-averaging interval ; snap-shot diagnostics output remains unchanged; |
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o pkg/timeave: |
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- S/R TIMEAVE_NORMALIZ: change size of cumulated-time array (was previously |
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always Nr), now assumed to be equal to number of levels of averaged field; |
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only used for DIC_COST monthly mean arrays: this fixes dic_aver_final.F |
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o pkg/sbo: |
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- fix ocean bottom pressure global-average & 2-D time-ave output (was |
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neither initialised nor filled). |
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- add starting iteration in suffix of global-average output file |
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(to avoid over-writing the file after a restart) |
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- use standard MDSIO pkg S/R instead of SBO_WRITEVECTOR (fix byte-swap Pb). |
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o time-average: |
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- use simple cumulative-time array (no k index) in all pkgs: {PKG}_timeAve(bi,bj) |
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(pkgs: aim_v23, bulk_force, dic, gmredi, kpp, land, ocn_compon_interf, |
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ggl90, my82, opps, pp81, ptracers, sbo, seaice, shelfice, thsice) |
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this fix DIC_COST cumulative-time array (previously: bi,bj,k) |
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- fix 1rst call (nIter0) snap-shot output and accumulation (pkg/shelfice) |
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- fix missing accumulation for pkg/opps. |
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- cumulate fields only if doing time-ave output ({PKG}_taveFreq > 0) |
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(pkgs: ptracers, kpp, ocn_compon_interf, ggl90, my82, pp81); |
| 64 |
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- fix initialisation of time-ave vars and do only full time-step increment |
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(i.e.: no first & last "half time-step") (pkgs: ggl90, my82, opps, pp81); |
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o pkg/layers: |
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- use standard RW pkg S/R to write the output |
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and remove local write_fld version (which had a problem). |
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- use simple cumulative-time array (no level index) to fix time-ave S/R calls. |
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- fix LAYERS_CALC argument list. |
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o pkg/timeave: |
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- store cumulative-time in a simple tiled array (drop the level index) |
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- add new S/R (TIMEAVE_NORMALIZE) which uses simple cumulative-time array. |
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o pkg/ocn,aim_compon_interf |
o pkg/ocn,aim_compon_interf |
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- changes for multi-threaded coupled run. (tested with ifort-11 on danton) |
- changes for multi-threaded coupled run. (tested with ifort-11 on danton) |
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