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revision 1.1186 by jmc, Tue Oct 27 16:04:16 2009 UTC revision 1.1202 by jmc, Mon Nov 30 20:32:11 2009 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o nonHydrostatic:
8      Fix missing vertical flux of vert. momentum near surface (k=1). This fixes
9        a spurious source of energy in simple baroclinic adjusment test case.
10      Update all non-hydrostatic exp output.
11    o model/src (3-d solver):
12      Change again 3-D solver free-surface RHS term when exactConserv=T:
13        simpler, consistent with exactConserv, and works with implicDiv2Dflow < 1
14        (which was not the case with previous formulation).
15      To recover previous version, just reset "oldFreeSurfTerm" to previous value.
16      Affects results of exp. global_ocean.cs32x15.viscA4 & hs94.cs-32x32x5.impIGW.
17    o nonHydrostatic:
18      - compatible with implicDiv2Dflow < 1 ; + implement implicit factor
19        for Non-Hydrostatic pressure gradient (similar to implicSurfPress).
20      - change 3-D solver to work with r* (for now, only with linear free-surf.)
21      - add few debug diagnostics (cg3d_x, residual)
22    o model/src:
23      fix missing EmPmR in 3-D solver RHS (was in cg2d_b but missing in cg3d_b).
24        update output of exp. global_ocean.cs32x15.viscA4
25    o update output of exp. global_ocean.cs32x15.icedyn after removing
26      #define SEAICE_OLD_AND_BAD_DISCRETIZATION from SEAICE_OPTIONS.h
27    o add entry points for Gianmaria's Nesting pkgs (from Contrib/nesting_sannino)
28    o mnc: add horizontal grid coordinates (XC,YC) and (XG,YG) to netcdf output
29      for complex grids, for now only to "state", "adstate", "adexf", "adseaice"
30    o model: add Christopher Wolfe's implemetation of the single reduction cg2d
31      (d'Azevedo, Eijkhout, and Romine, 1999) with CPP-flag ALLOW_SRCG and
32      runtime flag useSRCGSolver. Modify verification experiment global_with_exf
33      to test this code
34    o pkg/cd_code:
35      Change defaut D-grid time-stepping to get the same for D-grid momentum as for
36       C-grid momentum. D-grid velocity used to be stepped forward in time with
37       Adams-Bashforth only on surface pressure term. Tests show that using AB on
38       D-grid coriolis term improves stability (as expected from CD-scheme paper).
39      To reproduce old results, add 2 options (in CD_CODE_OPTIONS.h).
40      Update results of exp: global_with_exf (x2), ideal_2D_oce, isomip (x2),
41       lab_sea (3 Fwd +3 AD), natl_box (x2), tutorial_global_oce_biogeo (Fwd+AD),
42       tutorial_global_oce_latlon, tutorial_global_oce_optim & tutorial_tracer_adjsens.
43      Keep old results by adding CD_CODE_OPTIONS.h in exp: cfc_example, exp2,
44           lobal_ocean.90x40x15(+AD), global_ocean_ebm(+AD) and OpenAD.
45    o pkg/obcs:
46     - fix bug in initialisation (broken since Oct 1rst modification)
47       for useOBCSprescribe without useEXF.
48    
49    checkpoint61y
50    o pkg/seaice
51     - change (once again) the discretization for the evp solver: rather than
52       squaring the averages of strain rates, average the squares to give
53       a better approximation to VP behavior (in simple test); this breaks
54       verification experiments that use EVP (lab_sea and lab_sea.hb87)
55        --> update outputs
56    o add CPP-flag (in mom_calc_visc.F) and TAF directive (in gmredi_slope_limit)
57      to improve vectorization of adjoint code on TARGET_NEC_SX
58    o verification/vermix:
59      - change vermix to a more "classical" 1d column with high vertical
60        resolution, seasonal heat flux forcing and constant wind forcing
61        --> update outputs
62    o pkg/seaice
63     - fix diagnostics of principal stress components for EVP
64     - add optional diagnostics of non-linear convergence for LSOR solver
65     - make maximum zeta a runtime parameter
66    o model/src (3-d solver):
67      Undo modif from Dec 12, 2005 (solve_for_pressure.F cvs version v.49),
68       which consisted in removing the Surf. Non-Hydrostatic pressure from the
69       whole column and adding it to Eta (inspired from Casualli, 1999):
70       Only affects 3-D solver initial guess and only if using ExactConserv,
71       but tests did show a degradation of solver convergence. For this reason,
72       decide to disable this piece of code.
73       to recover previous version, just set zeroPsNH = exactConserv (line 78).
74      Update output of exp. global_ocean.cs32x15.viscA4 & hs94.cs-32x32x5.impIGW
75    o pkg/ggl90:
76     - fix previous modif (unfortunatly has not been documented here).
77  o pkg/seaice/autodiff:  o pkg/seaice/autodiff:
78   - add CPP flag to include clipping of zeta in EVP code;   - add CPP flag to include clipping of zeta in EVP code;
79     although clipping of zeta is not necessary for EVP and not recommended     although clipping of zeta is not necessary for EVP and not recommended
80     it was done by default, now clipping is disabled by default     it was done by default, now clipping is disabled by default
81   - modify computation and store zetaC/Z in seaice_evp for TAF   - modify computation and store zetaC/Z in seaice_evp for TAF
82   - add CPP-flag SEAICE_ALLOW_CLIPVELS (undefined by default)   - add CPP-flag SEAICE_ALLOW_CLIPVELS (undefined by default)
83   - change seaice_calc_viscosities/strainraties for better   - change seaice_calc_viscosities/strainrates for better
84     vectorization after AD by TAF     vectorization after AD by TAF
85   - rearrange common blocks in SEAICE.h once again for easier dumps of   - rearrange common blocks in SEAICE.h once again for easier dumps of
86     adjoint output, adjust adcommon.h and g_common.h     adjoint output, adjust adcommon.h and g_common.h
87   - change flux form of default advection scheme for better vectorization   - change flux form of default advection scheme for better vectorization
88     of adjoint code     of adjoint code

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