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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o Add well-mixed CO2 box in aim_v23 (which includes changes in pkg |
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aim_compon_interf, ocn_compon_interf, gchem, and dic to get coupling |
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with ocean biogeo) |
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o pkg/flt: |
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- do some cleaning and fix the restart ; |
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- add output.txt in flt_example/results to get this pkg tested. |
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o genmake2: add an EXTENDED_SRC option and flag. |
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for now, cannot be turned on on command line (only through genmake_local) |
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o pkg/mdsio: read/write vector: |
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- singleCpuIO: fix RL/RS in MDSWRITEVECTOR by calling new S/R MDS_BUFFERtoRL/RS |
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- singleCpuIO=F: fix arrType & filePrec & _BYTESWAPIO in both MDSREADVECTOR |
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& MDSWRITEVECTOR by calling new S/R MDS_RD/WR_VEC_RL/RS. |
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- affects gradient of test-exp "bottom_ctrl_5x5" (not due to _BYTESWAPIO) |
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(drop to 4 digits matching for grad). But this test does not look very |
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reliable (was already failling on eddy, fc5, at 6.digits). Update output. |
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checkpoint61g |
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o pkg/flt: |
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- move FLT_CPPOPTIONS.h to FLT_OPTIONS.h (standard name) |
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+ make OPTIONS file more standard. |
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- rename S/R MDSREADVECTOR_FLT to FLT_MDSREADVECTOR (to mach src file name) |
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- fix _BYTESWAPIO CPP-Flag |
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- standard reading of file-parameter "data.flt" |
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- fix argument list of S/R FLT_RESTART |
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still need to fix _BYTESWAPIO in pkg/mdsio/mdsio_writevector.F |
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o pkg/obcs: fix a CPP-flag, bug reported by Jeff Blundell |
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o gather_2d.F/scatter_2d.F: suppress vectorisation on NEC SX in respond to |
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a still unfixed compiler/optimization bug |
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checkpoint61f |
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o pkg/seaice, LSR solver: fix bug in GLOBAL_MAX calls ; |
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update results of global_ocean.cs32x15.icedyn test. |
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o move getcon.F from model/src to pkg/fizhi. |
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o pkg/exf: add parameter for extrapolation of temp up to the surface |
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and option to prevent negative evap (in bulk_largeyeager04 only). |
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o Prather Advection scheme: fix tracer conservation for divergent flow |
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(e.g., when using NonLin Free-Surface). |
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o kpp: retire KPPmld diagnostics --> use MXLDEPTH instead |
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o gmredi (Visbeck-variable-K): |
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- add more parameters to Visbeck-variable-K. |
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- use a 5 points average for dSigmaR in Visbeck-K calculation |
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(more "homogenous": same stencil and same weights as in dSigmaH) |
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- update output of ideal_2D_oce experiment. |
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o fix CPP-flag REAL4_IS_SLOW, when _RS expands into real*4 |
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(#undef REAL4_IS_SLOW) |
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- pkg/mnc/mnc_cw_cvars.F: write _RS-grid variable as netcdf-real*4 |
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coordinate variable |
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- pkg/monitor/monitor.F: call mon_printstats_rs for _RS variables |
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(surface forcing fields), removes some of the functionality |
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- model/src/write_grid.F: write _RS variables as RS-netcdf variables |
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- model/src/diags_oceanic_surf_flux.F: fix a few diagnostics, but |
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probably not all: copy _RS surface flux fields to RL field before |
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calling DIAGNOSTICS_FILL |
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- model/inc/CPP_EEMACROS.h: make the _EXCH_*_RS macros expand into |
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real*4 (CALL EXCH_*_RS) versions. |
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- tested in 2 experiments: inverted_barometer & solid-body.cs-32x32x1 |
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(generate new output). |
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checkpoint61e |
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o gmredi (Visbeck-variable-K): |
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- fix the "OLD_VISBECK_CALC" option + move the #undef to GMREDI_OPTIONS.h |
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- change computation of Visbeck-K where Slope > Smax : |
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now: N*min(Slope,Smax) (similar to OLD_VISBECK_CALC with gkw91 taperFct) |
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previously was: M*sqrt(min(Slope,Smax)) ; update ideal_2D_oce output. |
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o bottom-drag in P-coord.: change units of bottomDragLinear & bottomDragQuadratic |
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to be the same as with Z-coord. (i.e., m/s & no-units respectively). |
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o calc_viscosity: fix index range (was wrong for CD-Scheme & explicit Visc) |
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o pkg gmredi, linear & fm07 tapering: put an upper limit on Slope^2 so that Kwz |
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does not become too large (to avoid precision problems in implicit-diffusion |
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solver); update ideal_2D_oce output. |
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o pkg ggl90: |
o pkg ggl90: |
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- in ggl90_cal.F: compute only one set of visc/diff, used to |
- in ggl90_cal.F: compute only one set of visc/diff, used to |
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step forward TKE/T/S/momentum |
step forward TKE/T/S/momentum |
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- default value of GGL90viscMax/GGL90diffMax larger and equal (to |
- default value of GGL90viscMax/GGL90diffMax larger and equal (to |
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have Prandlt =1) |
have Prandlt =1) |
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o gmredi(fm07): |
o gmredi (fm07): |
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- add lower limit on Transition layer thickness + lower limit on 1/lambda |
- add lower limit on Transition layer thickness + lower limit on 1/lambda |
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- allow to set few more params from data.gmredi |
- allow to set few more params from data.gmredi |
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o pkg ggl90: |
o pkg ggl90: |
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