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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o cleaning-up: |
| 8 |
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- fix CPP instruction syntax in pkg/obcs |
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- replace (some) call to MDSIO S/R with call to RW interface S/R ; and |
| 10 |
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add #ifdef ALLOW_MDSIO elsewhere (allows to compile without pkg/mdsio) |
| 11 |
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- fix some threads issue in IO parts. |
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o pkg/dic: |
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- add tons of "_d 0" (--> much better testreports !) |
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and then update outputs of tutorial_global_oce_biogeo |
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o pkg/mom_fluxform: |
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add a special version of momentum advection intended to conserve momentum |
| 17 |
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next to a bathymetry step or a coastline edge. (default = off = #undef) |
| 18 |
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o new read/write pickup version: |
| 19 |
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- for now, only implemented for main (mdsio) pickup file. |
| 20 |
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- write out only what is needed to restart; merge pickup_nh , pickup_ph |
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and main pickup together. |
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- read meta file; read only what is needed to restart; stop if a field |
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is missing (if pickupStrictlyMatch=T, = the default) or try to restart |
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if it make sense (even if the restart is not perfect). |
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- if no meta file, assume that pickup to read corresponds exactly to |
| 26 |
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a pickup that would currently be written. |
| 27 |
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- read pickup written in the old format (until checkpoint59i) if it |
| 28 |
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recognizes an old meta file (no field-list). |
| 29 |
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- add a meta file in exp. which starts from a pickup: 2 cases: |
| 30 |
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a) minimal meta file (with just file precision) + pickupStrictlyMatch=F |
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e.g.: global_ocean.90x40x15/input/pickup.0000036000.meta |
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b) a meta file describing the content of the associated pickup file |
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e.g.: tutorial_global_oce_biogeo/input/pickup.0004248000.meta |
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o pkg/mdsio & pkg/rw: |
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- new routine to read a meta file ; new set of routine to read |
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Multiple-fields file (with meta file). |
| 37 |
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o added open boundary conditions capability for seaice |
| 38 |
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HSNOW, HSALT, UICE, and VICE |
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checkpoint59i |
| 41 |
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o adjoint: |
| 42 |
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* fix multiDimAdvection adjoint |
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(partial recomputation problem by TAF for fVerT(:,:,kDown) |
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and comlev1 size definition (maxpass vs. max. number of tracers) |
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* verification/global_ocean.90x45x15 adjoint now tests |
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NLFS and multiDimAdvection using DST3 (=30) |
| 47 |
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* verification/lab_sea now tests multiDimAdvection using DST3 (=30) |
| 48 |
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o pkg/kpp: add "_d 0" to real constant (if missing); |
| 49 |
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update output of exp: natl_box (10.digits); vermix (std, 7.digits) |
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and lab_sea, 3.FW (only 6,4,6 digits match) & AD (8.digits). |
| 51 |
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o prepare for "clever pickup" implementation: add new header file "RESTART.h" |
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for internal parameters related to restart process (formerly from PARAMS.h) |
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and add startAB parameter to argument list of S/R ADAMS_BASHFORTH2. |
| 54 |
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o more standard interface to {PKG}_WRITE_PICKUP with pickup suffix passed |
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as argument. (only atm2d & obcs write_pickup have not yet been updated) |
| 56 |
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o pkg/monitor: |
| 57 |
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- use GLOBAL_SUM_TILE instead of _GLOBAL_SUM |
| 58 |
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- fix mon_stats_rs (statistics over the full domain, even where field is zero) |
| 59 |
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- account for deep Atmosphere factor and density factor (anelastic) |
| 60 |
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o added open boundary conditions capability for seaice HEFF and AREA |
| 61 |
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o pkg/shelfice: add option for convservative form of Hellmer&Olbers (1989) |
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thermodynamics |
| 63 |
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- requires a little reorganization, which affects the testreport results |
| 64 |
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of isomip.htd (only 7 digits of cg2d agree) => update/modify experiment, |
| 65 |
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so that now the conservative form is tested |
| 66 |
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- add a few comments |
| 67 |
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o add missing cvs Header: or Name: in eesupp/*, pkg/* & verification/code* |
| 68 |
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o add a little bit of code to gad_os7mp_adv_?.F to help vectorization |
| 69 |
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o add new diagnostics to seaice: advective, diffusive fluxes (only for |
| 70 |
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multidim-advection, for scheme 2 they are not filled) and transports, |
| 71 |
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thermodynamic growth rates |
| 72 |
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o change units of EmPmR (inside the code, + within coupling interface) |
| 73 |
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from m/s to kg/m2/s (mass flux) but leave input file unchanged. |
| 74 |
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Affects results @ truncation level (cg2d match) and update output of |
| 75 |
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experiments: lab_sea(6), global_ocean.90x40x15(10), |
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global_ocean.cs32x15(11x3,10), natl_box(11), tutorial_global_oce_latlon(11) |
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+ adjoint results: global_ocean_ebm(11) and lab_sea (12). |
| 78 |
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Coupled set-up: allow to restart from previous pickups (cpl_oldPickup=T). |
| 79 |
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Next: will retire convertEmP2rUnit (simply using mass2rUnit instead). |
| 80 |
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| 81 |
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checkpoint59h |
| 82 |
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o pkg/exf: |
| 83 |
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- improve vectorization by moving if-statement out of loops in |
| 84 |
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exf_mapfields, exf_radiation |
| 85 |
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- exf_bulkformulae.F: introduce 2D fields and vectorize code |
| 86 |
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o pkg/kpp: added the salt plume scheme (ALLOW_SALT_PLUME) to KPP package |
| 87 |
o testreport: |
o testreport: |
| 88 |
- allow to test for Qnet & SeaIce monitor output; clean-up ALLOW_BULK_OFFLINE |
- allow to test for Qnet & SeaIce monitor output; clean-up ALLOW_BULK_OFFLINE |
| 89 |
monitor & update offline_exf_seaice exp. output. |
monitor & update offline_exf_seaice exp. output. |
| 385 |
ATMOSPHERIC_LOADING is #define). |
ATMOSPHERIC_LOADING is #define). |
| 386 |
o pkg/kpp: replaced _KPP_RL with _RL |
o pkg/kpp: replaced _KPP_RL with _RL |
| 387 |
o bug fixes for vertical diffusivity computations when both KPP and |
o bug fixes for vertical diffusivity computations when both KPP and |
| 388 |
3D diffusivity arrays are used. |
3D diffusivity arrays are used; pkg/kpp/kpp_calc_diff_s & _t.F |
| 389 |
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are no longer updating the vertical diffusivity array |
| 390 |
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(passed as argument) but are (re-) setting those arrays. |
| 391 |
o pkg/seaice: fix bug in evp solver, while doing that |
o pkg/seaice: fix bug in evp solver, while doing that |
| 392 |
- change (improve?) discretization of stress computations for both |
- change (improve?) discretization of stress computations for both |
| 393 |
cgrid-lsr and evp solver |
cgrid-lsr and evp solver |
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