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revision 1.395 by mlosch, Mon Nov 29 20:30:52 2004 UTC revision 1.411 by jmc, Mon Dec 13 23:12:03 2004 UTC
# Line 2  $Header$ Line 2  $Header$
2    
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    o re-arrange diagnostics pkg initialisation:
6     - allow each package to extend the available diagnostics list
7     - add some checking and fix small problems (multi-threaded, ...)
8     - new S/R diagnostics_fill (replace fill_diagnostics):
9       look through the short list of active diag. (instead of the long list)
10       create function DIAGNOSTICS_IS_ON to tell if a diagnostics is active
11    
12    checkpoint57a_post
13    o this set of changes restores TAMC compatibility
14      tested for global_ocean.90x40x15 adjoint on trough
15      (what a pain)
16    
17    checkpoint57a_pre
18    o some modifs in tools/build_options for sunos
19    o call ctrl_pack for ctrl at end for optimcycle=0
20    
21    checkpoint57
22    o add horizontal bi-harmonic viscosity for vertical velocity
23      - new parameter viscA4W (defaults to viscA4)
24      - affects only non-hydrostatic code
25      - to be done: no-slip lateral boundary conditions
26    o switch back to "sflux = sflux - runoff" in exf_getforcing.F
27    o implement Implicit Vertical advection for pTracers
28    o depth convergence accelerator: replace deltaTtracer by dTtracerLev(k)
29      (implemented also for implicit vertical diffusion & advection)
30    o OBCS: extend application of tracer open boundary conditions
31      to a strip beyond the boundary of width Olx/Oly
32    o add call monitor to TAF set of required calls (flow directives)
33      and include in natl_box_adjoint
34    o untangle a few ifdefs related to cost, ctrl, autodiff
35      untangel a few ALLOW_ECCO_OPTIMIZATION
36    o Apply Cooper & Haines representative estimates also at sub-surface (k=Nr)
37      (theta2, salt2 in ecco_cost_weights)
38    
39    checkpoint56c_post
40    o OBCS as control variables
41      - update ctrl_ad_diff.list, obcs_ad_diff.list
42      - remove balance of obcs controls from default
43      - fix index bug nobcs in ctrl_init
44      - fix dummy fields filen in ctrl_pack
45      - add dummy weights for obcs
46    o lsopt: comment out fort.94 output
47    o optim:
48      - remove unnecessary header files
49      - adjusted namelists
50      - add xerbla.F to Makefile
51    o exf:
52      - multiple modifications of exf_check_range
53      - unit change in exf_init_runoff from [m/year] to [m/s]
54    o mdsio:
55      - i/o-vector change debugLevel from debLevA to debLevB
56    
57    checkpoint56b_post
58    o collect all ptracers output in an new routine (PTRACERS_OUTPUT) that
59      is called from DO_THE_MODEL_IO
60      - rename PTRACERS_STATV_WRITE to PTRACERS_WRITE_TIMEAVE
61      - introduce new parameter PTRACERS_dumpFreq (defaults to dumpFreq)
62      - clean up PTRACERS_WRITE_TIMEAVE a little
63    o add another verification experiment that tests both the cfc-pkg and
64      the gchem-pkg with GCHEM_SEPARATE_FORCING undefined, that is with
65      reactive tendencies treated inline with regular timestepping
66  o testreport previously did a lousy job of comparing small numbers, so  o testreport previously did a lousy job of comparing small numbers, so
67    we (Ed and Martin) changed the  way the cut-off of 1.e-12 is    we (Ed and Martin) changed the  way the cut-off of 1.e-12 is
68    implemented in the little c-progam tmp_cmpnum.c which is embedded in    implemented in the little c-progam tmp_cmpnum.c which is embedded in

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