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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
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o pkg/exf: improve vectorization by moving if-statement out of loops |
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o pkg/kpp: added the salt plume scheme (ALLOW_SALT_PLUME) to KPP package |
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o testreport: |
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- allow to test for Qnet & SeaIce monitor output; clean-up ALLOW_BULK_OFFLINE |
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monitor & update offline_exf_seaice exp. output. |
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- AD testing: pass/FAIL according to Grad. output accuracy (instead of Cost) |
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o pkg/seaice: |
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- bug fix in the evp solver: boundary conditions were affected be |
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masking of zMax/zMin (changes results) |
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- minor bug fix in boundary conditions in seaice_calc_strainrates |
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(changes results for no_slip) |
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- seaice_lsr.F: make interpolation of eta dependent on boundaries |
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- replace hardcoded lower limit for zeta (zMin) by runtime parameter |
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- add a test to lab_sea, that tests the Hibler and Bryan (1987) ocean |
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stress formulation and no-slip boundary conditions |
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o pkg/ptracers: Temporary fix for PTRACERS_useGMRedi & PTRACERS_useKPP |
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in gad_calc_rhs.F ; add few safety stops in initialisation phase. |
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o pkg/seaice: a first HSALT time stepping equation has been checked in |
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o pkg/seaice: replaced maskW with seaiceMaskU and maskS with seaiceMaskV |
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in seaice_lsr.F; this solves the pkg/seaice-pkg/obcs problem |
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without requiring DO-IF statements |
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o pkg/thsice: |
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use continuous power-law function for partition of energy between lateral |
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melting/freezing and thinning/thickening ; old code using step function |
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still available with #undef THSICE_FRACEN_POWERLAW |
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update output of exp: aim.5l_cs.thSI, global_ocean.cs32x15.icedyn & .thsice |
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o testreport: change AD testing : check against results/output_adm.txt |
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using same scripts as for forward test. |
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checkpoint59g |
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o adjoint testing: in preparation for changing testreport: |
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- output format: cost and grad written on separated lines |
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- ad output results in directory "results" (instead of "results_ad") |
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o pkg/seaice: adding ice salinity HSALT as a prognostic variable |
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o pkg/seaice: changes for using pkg/seaice with pkg/obcs |
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o pkg/ecco: allow user defined cost function contributions |
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o testreport: |
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Allow to choose (per experiment) the list of tested output variables |
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and the main variable (used to issue a pass/FAIL ) ; |
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- for now, done by adding the specific list in file: [exp]/input/tr_checklist |
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- default is unchanged: >cg2d< , (T,S,U,V,5 tracers)_[min,max,mean,StD] ; |
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Also modify printing of summary: |
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a) ">" NN "<" indicates the "main" variable (used for pass/FAIL) |
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b) echo the list of tested variables in the individual summary.txt of |
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each experiment. |
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o new S/R GLOBAL_SUM_TILE to compute global sum independently of number of |
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threads and number of processes (with #define GLOBAL_SUM_SEND_RECV) |
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(but still depend on the tile decompostion of the domain). |
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o pkg/seaice: change a discretization detail to make the B-grid code |
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"more symmetric". This change is likely to remove all "ridges/leads" that |
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where quasi-aligned with the grid in B-grid solutions. It may also be |
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the solution to the stress coupling issues with the B-grid. |
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o each tested exp: add a "run" directory with a standard ".cvsignore" file ; |
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remove .cvsignore from input dir. (since testreport no longer run here). |
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o pkg/thsice: |
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- cleaning: move common block out of "THSICE_2DYN.h" (removed) to "THSICE_VARS.h" |
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- fix reshaping of sea-ice just after advection: |
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melt all the ice only if ice-volume is too small. |
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- re-visit lateral/thinning repartition of melting (modifs from May 04, 2007): |
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prevent lateral melting if sea-ice fraction is too close to iceMaskMin ; |
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and update experiment global_ocean.cs32x15.icedyn (+start from pickup files). |
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o external_forcing_surf : extend the use of salt_EvPrRn & temp_EvPrRn (fresh-water |
o external_forcing_surf : extend the use of salt_EvPrRn & temp_EvPrRn (fresh-water |
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tracer content) to linFS or no RealFreshWaterFlux ; default remains unchanged. |
tracer content) to linFS or no RealFreshWaterFlux ; default remains unchanged. |
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o define mass2rUnit & rUnit2mass as units conversion factor, used for surface |
o define mass2rUnit & rUnit2mass as units conversion factor, used for surface |
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ATMOSPHERIC_LOADING is #define). |
ATMOSPHERIC_LOADING is #define). |
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o pkg/kpp: replaced _KPP_RL with _RL |
o pkg/kpp: replaced _KPP_RL with _RL |
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o bug fixes for vertical diffusivity computations when both KPP and |
o bug fixes for vertical diffusivity computations when both KPP and |
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3D diffusivity arrays are used. |
3D diffusivity arrays are used; pkg/kpp/kpp_calc_diff_s & _t.F |
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are no longer updating the vertical diffusivity array |
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(passed as argument) but are (re-) setting those arrays. |
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o pkg/seaice: fix bug in evp solver, while doing that |
o pkg/seaice: fix bug in evp solver, while doing that |
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- change (improve?) discretization of stress computations for both |
- change (improve?) discretization of stress computations for both |
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cgrid-lsr and evp solver |
cgrid-lsr and evp solver |
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