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revision 1.570 by edhill, Wed Oct 12 16:08:16 2005 UTC revision 1.595 by heimbach, Thu Dec 22 21:16:17 2005 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o make CG3D solver compatible with Free-surface at k > 1 (p-coordinate):
8      affects output (@ truncation level) of exp. plume_on_slope ; updated.
9    o fix the pickup behavior for obcs in combination with ptracers
10    o fix a bug in ptracers_external_fields_load
11    o no AB-2 at the first iteration for Gw (consistent with Gu,Gv,Gt,Gs ...)
12      affects results of NH experiments (but all our NH tests have Gw[it=1]==0 !!)
13    o transfered surface NH pressure to eta field (if exactConserv).
14    o gmredi: fix bugs in slope tapering ldd97 (depthZ had the wrong sign)
15         and update lab_sea output.txt file.
16    o completing 3-dim. relaxation code: additional term
17         1/tau*( theta(i,j,k) - thetaStar(i,j,k) )
18      in S/R EXTERNAL_FORCING_T (file external_forcing.F)
19      * At compile time, in "EXF_OPTIONS.h" set
20          #define  ALLOW_CLIMTEMP_RELAXATION
21          #define  ALLOW_CLIMSALT_RELAXATION
22      * At runtime in "data", under &PARM03 set (e.g., units in seconds)
23          tauThetaClimRelax3Dim = 15552000.0,
24          tauSaltClimRelax3Dim  = 15552000.0,
25      * 3 cases:
26          1) Use a constant-in-time 3-dim. field
27          2) Provide 12 3-dim. fields corresponding to Jan., ... , Dec.
28          3) Real-time relax. to time-evolving prescribed field
29    o Adding Laplacian-type smoothness constraint on
30      initial and boundary (forcing) controls (ic, bc)
31      * enable at compile-time via
32        ALLOW_SMOOTH_IC_COST_CONTRIBUTION, ALLOW_SMOOTH_BC_COST_CONTRIBUTION
33      * enable at run-time via mult_smooth_ic = 1, mult_smooth_bc = 1
34      * Absolute scale somewhat unclear so far
35      * no area weighting was included since no other cost term does so far
36    
37    checkpoint57y_post
38    First step for a NLFS adjoint
39    o initially suppress rStar (new flag DISABLE_RSTAR_CODE)
40    o new init. routines for calc_r_star, calc_surf_dr
41    o still need to deal with ini_masks_etc
42    o testreport seemed happy
43    checkpoint57y_pre
44    
45    o obcs: always reset wVel & eta (to zero or prescribe it) at the OBs.
46    o add new package rbcs (for relaxing ptracers at boundaries/depth/surface etc)
47    o add new offset feature to offline pkg (plus minor cleanup)
48    o cfc fixes for final year of integration
49    o clean up GCHEM_OPTIONS.h/DIC_OPTIONS.h (all options should
50      be in GCHEM_OPTIONS).
51    
52    checkpoint57x_post
53    o fix testreport Pb in multiple test experiment.
54    o cleanup our namelist syntax in verification:
55      - make it more F95 standards compliant (some work still needed)
56      - allows the vast majority of our tests to work with gfortran
57    o Non-Hydrostatic:
58     - put all NH variables (formerly in DYNVARS.h & GW.h) in NH_VARS.h
59     - fix exchange calls for CS-grid using the new EXCH_S3D_RL.
60    o Allow to apply AB on T,S rather than on AB(gT,gS):
61     - implemented within #ifdef ALLOW_ADAMSBASHFORTH_3
62     - use the same arrays (gtNm,gsNm) to hold tracer field at previous
63       time-steps (if AB(T,S)) and tendencies (if AB(gT,gS)).
64     - need a "clever" read_pickup to restart from the other AB formulation
65    o move local commom bloc /GlobalLo/ (used for singleCpuIO) in EESUPPORT.h
66    o remove some unused variables (reduces number of compiler warnings)
67    o adjoint
68      * Disable useVariableViscosity for adjoint for time being
69        (there are a number of extensive recomputations)
70      * Initialize certain variables needed for adjoint
71    
72    checkpoint57w_post
73    o pkg/mdsio: use MAX_LEN_FNAM (instead of hard coded 80) for file-names
74                 fix the singleCpuIO RS version of MDSWRITEFIELD
75       and add a WARNING if using globalFiles=T with multi-processors.
76    o write grid-file(s) in only one format (MDS or MNC): default=MNC (if
77      using MNC); can force MDS output by setting writegrid_mnc=F in data.mnc
78    o tracer advection scheme:
79      add DST-2 (=Lax-Wendroff) & 1rst order upwind schemes (the way to get
80       those 2 schemes before, changing GAD_FLUX_LIMITER.h + to recompile,
81       was not very convenient).
82      add implicit version for DST-3 & DST3_Flux_Limit vertical advection;  
83       (further tests needed for the implicit DST & Flux-Limiter schemes).
84    o PTRACERS: added namelist parameter PTRACERS_ref in analogy to tRef
85      and sRef for convenience, handy, when you want to initialize
86      ptracers in a large domain with a constant non-zero value. Also,
87      untangle ptracers_init.F a little.
88    
89    checkpoint57v_post
90    o change dome exp. to use variable viscosity in side-drag terms.
91  o remove all the files from the cfc_offline test since they are now  o remove all the files from the cfc_offline test since they are now
92    incorporated into tutorial_cfc_offline which has been producing    incorporated into tutorial_cfc_offline which has been producing
93    identical results for a few days of testing    identical results for a few days of testing
94    o add new parameter: sideDragFactor to enable half-slip-side BC
95      and change side-drag S/R to use viscosity from mom_calc_visc
96      (can switch back by setting sideDragFactor=0.); affects results at
97      truncation level; regenerate output for exp.: global_ocean.cs32x10(x3),
98       global_ocean_ebm, global_ocean_pressure, matrix_example & MLAdjust(x5).
99  o vorticity & strain are now computed without masking, to account for  o vorticity & strain are now computed without masking, to account for
100    no-slip-side BC in variable viscosity calculation ; mask is applied    no-slip-side BC in variable viscosity calculation ; mask is applied
101    anyway later on, before computing advection/coriolis terms.    anyway later on, before computing advection/coriolis terms.
102  o modify exp4 to test new obcs support reading from external files  o modify exp4 to test new obcs support for reading from external files
103    and for passive tracers    and for passive tracers
104  o fix behavior of ptracers_monitor when monitor output is written to a  o fix behavior of ptracers_monitor when monitor output is written to a
105    netcdf-file; still not independent of monitor.F (writes in the same    netcdf-file; still not independent of monitor.F (writes in the same

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