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revision 1.469 by heimbach, Sun Apr 3 16:11:00 2005 UTC revision 1.514 by jmc, Thu Jul 14 15:34:00 2005 UTC
# Line 1  Line 1 
1  $Header$  $Header$
2    $Name$
3    
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    checkpoint57l_post
8     tag before updating tutorials (pre-release-2)
9    o add cos & sin of grid-direction orientation angle (curvilinear grid only,
10       for output and interpolation of input fields onto model grid)
11    o fix radius in mom_v_metric_cylinder.F (wrong by dy/2).
12       Affects results of exp. rotating_tank ; update output.txt.
13    o pkg/diagnostics: 2 new S/R to fill a diagnostics using a scaling factor
14          and taking the square quantity and/or using a fraction-weight field.
15    o fix aim_diagnostics_init.F mate numbers.
16    o add mnc output capability to diagnostics/diagstat and update
17      our cvsignore files for the ACSII output generated
18    
19    checkpoint57k_post
20    o lab_sea now uses diagnostics package and provides a suite of
21      new EXF diagnostics output.
22    
23    checkpoint57j_post
24    o exf
25      * bug fix in exf_bulkformulae for psimh (spotted by Eliyahu Biton):
26        Bracket missing in eqn. for psimh (eqn. 7 of Large & Pond, 1982);
27        terms -2*ATAN(x) + pi/2 were added to both stable and unstable case.
28      * extended diagnostics output
29        - now includes all EXF variables
30        - hs, hl moved to common block
31        - separate S/R for diagnostics, called after ctrl vector is added
32        - name changed for EXFsw -> EXFswnet, EXFlw -> EXFlwnet
33        - EXFqnet contains true Qnet (i.e. includes qsw)
34      * updated verif. lab_sea, global_with_exf
35      * Rearranging hflux (exf_mapfields -> exf_getforcing)
36        to ensure that diagnostics sees a true EXFqnet
37    o add matlab scripts for CS-grid vectors (in utils/cs_grid)
38    o diagnostics pkg: change pointers so that 1 diagnostic can be used
39      several times with different frequencies.
40    o mnc-ify the thsice package as requested by Daniel Enderton
41      - the monitor--MNC output needs work
42      - many attributes need to be added (most are currently blank)
43    o mnc-ify theaim_v23 package as requested by Daniel Enderton
44      - many attributes need to be added (most are currently blank)
45    o remove "groundAtK1" & "rkFac" (replaced by usingPCoords & -rkSign)
46    o add Sadourny like discretization to the 4th.O vorticity advection scheme
47    o fix bug in rStar code (calc_r_star.F) when used with topo/bathy.
48      update output.txt from: aim.5l_cs (& .thSI), cpl_aim+ocn,
49         fizhi-gridalt-hs and global_ocean.cs32x15 (& .thsice).
50    o fix few little things to avoid floating error with -ftrapuv (ifort v9)
51     (ini_spherical_polar_grid.F, calc_r_star.F, monitor/mon_surfcor.F)
52    
53    checkpoint57i_post
54    o Diagnostics package was changed: diagnostic allocation is now deactivated
55      by setting an empty file name in the namelist (used to be by setting 0 frequency)
56    o momentum advection (VI form) options: activate 4th.O vorticity Coriolis ;
57      add 1rst Order upwind vertical Shear.
58    o add a quick fix for A/B checkpointing in OFFLINE mode
59    o add IGNORE_TIME define and -ignore_time option to genmake2 as an
60      end-run around the C/Fortran linking horror in eesup/src/timers.F
61    o added pkg/runclock: allows user to terminate run based on wall clock
62    o added non-hydrostatic scaling parameter: nh_am2
63    o pkg/my82: futile attempt to make results compiler-independent by adding
64      some "_d 0", etc. no effect.
65    o for mnc output, fill the 'T' coordinate var with myTime and create a
66      separate 'iter' variable for iteration count
67    o pkg/diagnostics:
68      add new capability: output of Global/Regional & per-level statistics ;
69      tested against monitor output (including land & thSIce) on various exp.
70    o make seaice-pkg I/O type flags (MNC/MDS) more standard.
71    
72    checkpoint57h_done
73      tag after changing user customized files (DIAGNOSTICS_SIZE.h,
74      data.diagnostics, data.gchem, data.ptracers) is done.
75    
76    o pkg/diagnostics: prepare for Global/Regional statistics.
77      add 2nd namelist in data.diagnostics and update DIAGNOSTICS_SIZE.h
78    o remove "baseTime" (no used) from arg. list of DIFF_BASE_MULTIPLE
79      and rename it: DIFFERENT_MULTIPLE
80    
81    checkpoint57h_post
82    o move tIter0 from data.gchem to PTRACERS_Iter0 in data.ptracers
83    o pkg/diagnostics: change output frequency, now in seconds (instead
84      of Nb of iterations). This requires to change data.diagnostics.
85    checkpoint57h_pre
86    
87    o in mnc, let the user create the output dir if both mnc_outdir_date
88      and mnc_outdir_num are false
89    o add fflags() to pkg/diagnostics which allows one to specify, on a
90      per-file basis, the file precision [default behavior is unchanged]
91    o added diagnostics to pkg/kpp, including computation of mixed layer
92      depth based on a temperature/density criterion
93    o updated verification/natl_box to test the new pkg/kpp diagnostics
94    o bugs fixed (with useAbsVorticity=T & with useJamartMomAdv=T)
95    o test AB-3 code with 4th.Order advection scheme (advect_xy/input.ab3_c4)
96    o fix mnc flags in pkg/seaice so that they are "owned" by seaice,
97      not mnc -- this mistake was found by JMC and is now corrected
98    
99    checkpoint57g_post
100    o add Adams-Bashforth 3rd Order time stepping:
101      - default remains AB-2 (#undef ALLOW_ADAMSBASHFORTH_3)
102      - not yet implemented with NH, CD_Scheme, pTracers, MNC_pickup ...
103    checkpoint57g_pre
104    
105    o make lambda[Theta,Salt]ClimRelax spatially varying
106      (default remains spatially uniform constant based on tau)
107    o added new control variables
108      * init. uVel, vVel, etanN
109      * lambda[Theta,Salt]ClimRelax
110    o separate masks used for ctrl_pack/unpack 'from write_grid' output
111      (suggested by G. Forget)
112    
113    checkpoint57f_post
114    o add parameter "baseTime" = model base time = time at iteration zero
115      new function DIFF_BASE_MULTIPLE (replace DIFFERENT_MULTIPLE) to
116      account for baseTime shift
117    o move Coriolis arrays from PARAMS.h to GRID.h
118    checkpoint57f_pre
119    
120  o mnc-ifying the seaice package  o mnc-ifying the seaice package
121  o introduced an alternative length scale calculation for use in the limiting  o introduced an alternative length scale calculation for use in the limiting
122    maximum viscosity (off by default, see mom_vi_hdissip.F for details)    maximum viscosity (off by default, see mom_vi_hdissip.F for details)
# Line 24  o adjoint-related modifications Line 138  o adjoint-related modifications
138    
139  checkpoint57e_post  checkpoint57e_post
140  o Adding eddy stress controls a la Ferreira et al.  o Adding eddy stress controls a la Ferreira et al.
141  checkpoint57e_pre  checkpoint57e_pre (actually was tagged: eckpoint57e_pre)
142    
143  o fizhi pkg: fix AtoC and CtoA when called with same input & output array  o fizhi pkg: fix AtoC and CtoA when called with same input & output array
144    update output.txt of exp. fizhi-gridalt-hs    update output.txt of exp. fizhi-gridalt-hs

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