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revision 1.289 by cnh, Thu May 6 13:51:15 2004 UTC revision 1.327 by edhill, Thu Jul 8 20:58:24 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    o add testreport "-j JOBS" option for parallel builds (tested and pretty
7       impressive on Altix and Opteron systems)
8    o diagnostics can now write NetCDF files through the mnc package
9    o staggerTimeStep & NLFS: update pkg aim_v23 & thsice; update aim.5l_cs output
10    o staggerTimeStep & multi-Dim-Advec: Exch(U,V) added
11    o staggerTimeStep & NLFS: rescale T & S surface tendencies.
12      affects (truncation error) output of lab_sea & natl_box exp.: updated
13    o change pickup _cd & _ptracers (old pickup restart: usePickupBeforeC54=.T.)
14    
15    checkpoint54a_post
16    o re-write staggerTimeStep: step fwd U,V and then T,S (reverse the order).
17    o change pickup file (to restart from old pickup, set usePickupBeforeC54=.T.)
18    o get a perfect restart when using RealFreshWaterFlux + NLFS (not finished)
19    o update output of all exp. that use staggerTimeStep (except hs94.cs & 2D)
20      + internal_wave (shift in writing cg2d_ini_res)
21    checkpoint54a_pre
22    
23    o require forcing_In_AB=.FALSE. and remove surfaceTendencyTice from pkg/seaice
24      - modified verification/lab_sea and natl_box_adjoint accordingly
25    
26    checkpoint54
27    checkpoint53g_post
28    o prepare splitting of thermodynamics: store convect.counter in common block
29    o store d.etaH/dt (instead of Div.hV) in common ; affects (truncation error)
30      output of: global_ocean.cs32x15, global_ocean_pressure & internal_wave
31    o cnh's modifs to gad_advection.F for cube-sphere multi-dim advection
32    o new parameter "nShapS": allow to treat differently S from T (nShapT)
33    o separate Vert.Advec.Scheme from horizontal Advec.Scheme (T & S)
34    o restore adjointability
35    
36    checkpoint53f_post
37    o modifications that affect AIM experiment results (update output.txt):
38      - no advection of S at top interface Nr (pkg/generic_advdiff)
39      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
40    o AIM pkg:
41      - include stability function into surf.Flux derivative relative to Tsurf
42      - calculate clear-sky radiation & surface temp. change (for diagnostics)
43    
44    checkpoint53e_post
45    o merged cylindrical coord configuration
46    o added rotating_tank experiment
47    checkpoint53e_pre
48    
49    checkpoint53d_post
50    o faulks upgraded: re-generate output.txt that have changed:
51       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
52    o Added Bryan and Lewis, 1979, vertical diffusivity profile
53    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
54    o added Sadourny discretization of Coriolis
55      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
56      - re-enabled use of omega3 (useAbsVorticity)
57    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
58      vector-invariant equations
59      - note: does *NOT* yet use same variable visc. for no-slip BC's.
60    o recoded the lateral boundary conditions for non-hydrostatic w, this time
61      hopefully without new bugs
62      - still to do: biharmonic friction for non-hydrostatic w
63    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
64    o regenerated output for global_ocean_ebm (using -ieee)
65    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
66      of mom_common/
67      - simple re-arrangement of instructions within computing loop
68    checkpoint53d_pre
69    
70    checkpoint53c_post
71    o new version of coupler for AIM+thSIce and Ocean models
72     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
73     - land: change Evaporation of snow
74     - aim with thSIce: fix bug in snow-precip.
75    o changes to calc_gw.F
76     - bug fix for w^2 term near the bottom boundary
77     - (hopefully) improve the lateral slip boundary condtions for use with
78        partial/looped cells
79      - because the bug fix changes two verification experiments anyway (exp5
80        and plume on slope), change the lateral boundary condition from half slip
81        to the value of no_slip_sides
82    o ebm package wasnt quite up to the parallel task. Fixed that.
83    o Adjoint of EBM package + verification
84      * TLM OK
85      * ADM not sufficient accuracy yet (needs further testing)
86    
87    checkpoint53b_post
88    o Commiting new energy balance model to repository
89      * package is pkg/ebm
90      * verif. is verification/global_ocean_ebm
91      * references are in ebm_driver.F
92    C      * X. Wang, P. Stone and J. Marotzke, 1999:
93    C        Global thermohaline circulation. Part I:
94    C        Sensitivity to atmospheric moisture transport.
95    C        J. Climate 12(1), 71-82
96    C      * X. Wang, P. Stone and J. Marotzke, 1999:
97    C        Global thermohaline circulation. Part II:
98    C        Sensitivity with interactive transport.
99    C        J. Climate 12(1), 83-91
100    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
101    C        Destabilization of the thermohaline circulation
102    C        by atmospheric eddy transports.
103    C        J. Climate 7(12), 1870-1882
104    o Will need long integration testing.
105    checkpoint53b_pre
106    
107    o created pkg/mom_common in preparation for variable viscosity code
108    o renamed and split ini_mnc_io
109    o pkg/land: only liquid water can diffuse or run-off
110    o AIM using land: soil wetness availability account for snow
111    o added printMapIncludesZeros to EEPARMS namelist
112    
113    checkpoint53a_post
114    o restore TAMC compatiility for exf_constants.h
115      (no usage of _d in .h)
116    o Additional storing in KPP in an attempt to fix
117      TAMC problem with adjoint of KPP code.
118      (no success...)
119      Identical code works fine with TAF.
120    o Fixed verification/natl_box_adjoint experiments.
121      Initial conditions for Experiments 4 and 5 are now
122      set to "SEAICE_initialHEFF=0", which is more reasonable,
123      and hence gives results closer to that of Experiment 2.
124      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
125    
126  checkpoint53  checkpoint53
127  o stable checkpoint with up to date adjoint  o stable checkpoint with up to date adjoint
128    TLM tests only run for 1st grdchk at the moment. Its unclear if    TLM tests only run for 1st grdchk at the moment. Its unclear if

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