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revision 1.331 by jmc, Sun Jul 18 01:57:02 2004 UTC revision 1.346 by heimbach, Fri Sep 17 23:19:12 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    checkpoint55
7    o up-to-date adjoint of previous breaks
8      - natl_box_adjoint: problem for exp 12, 13: cost = 0. needs fix
9      - global_ocean_ebm: adjoint still needs fix (TLM ok)
10      - global_ocean.90x40x15: extended GMREDI_OPTIONS.h
11      - carbon: * remove tr1-related adjoint verification
12                * add ptracer as control variable
13    o remove all tr1-related code (ALLOW_PASSIVE_TRACER)
14      (adjoint stuff still has some tr1 'names', but all use ptracer arrays)
15    
16    checkpoint54f_post
17    o in verification/carbin/ remove experiment related to
18      ALLOW_PASSIVE_TRACER (array tr1 etc)
19      code_ad/ input_ad/ results_ad
20    
21    o add two new packages
22      - ggl90, TKE-model of Gaspar et al. (1990), Blanke+Delecluse (1993)
23        + subject to optimization (memory)
24      - opps, OPPS (ocean penetrative plume scheme) of Paluszkiewicz+Romea (1997)
25        + subject to reordering (many GOTOs in the original code)
26        + so far opps is called for every (i,j) point, and then operates in
27          the vertical; one may want to reorder the scheme in order operate in
28          horizontal slabs at the cost of (a lot of) memory, at least ten new 3D
29          fields)
30    o overhaul of IO so that we now have flags for MDSIO and/or MNC
31      - all verification tests compile and run with linux_ia32_g77
32      - defaults are compatible with current input files--nothing
33        should change if you were not previously using MNC
34      - MNC output has been added in numerous places (eg. timeave)
35        but there are still a few writes not yet do-able with MNC
36        (this is in progress)
37      - flags now allow for either/or/both use of MDSIO and MNC and
38        documentation will soon follow
39      - numerous small formatting cleanups for ProTeX
40    o add version info (via BUILD_INFO.h) to MNC and stdout
41    
42    checkpoint54e_post
43    o add two new packages
44      - pp81 (Packanowski and Philander, 1981), Richardson number and
45        stratification dependent mixing
46      - my82 (Mellor and Yamada, 1982) level 2 turbulence closure scheme
47      - these scheme operate in a similar manner as KPP (without ghat, of
48        course), however there is only one diffusivity that is used for both
49        temperature and salinity (and passive tracers)ç
50    o add offline package
51    o add "verification/dic_example" which contains a dic-gchem-ptracer setup
52      provided by Stephanie Dutkiewicz
53    o genmake2: add ability to search for C compilers and cleanup test output
54      - fixes recent SX-6 problems and should help with others (eg. HP-UX)
55    
56    checkpoint54d_post
57    o data.diagnostics: if levels() is unspecified then ALL levels are diagnosed
58    o bug fix in pkg/cal/cal_addtime.F for TheCalendar='model' day count is wrong,
59      leading to additional shift by 5 days each year of integration
60       (i.e. leading to considerable offset over the years)
61    o update global_ocean.cs32x15/thsice: use z* + RealFW + staggerTimeStep
62    o start with no AB and no initial filtering (staggerTimeStep):
63      change the results of test-exp: hs94.128x64x5, hs94.1x64x5 & hs94.cs-32x32x5
64    o move ocean specific S/R calls from forward_step.F to do_oceanic_phys.F
65      (external loading & cpl import/export stay in forward_step.F)
66    o update coupling interface to work with new staggerTimeStep
67    o change MDSIO ptracers_pickup.
68    o fix a bug in Flux deriv. vs Ts (pkg/aim_v23/phy_suflux_sice.F);
69    o genmake2 fixes so netcdf now works on halem ("osf1_alpha_*")
70    o bugs fixed in kpp_calc.F (ustarY) and external_forcing.F (Qsw & Partial-cell)
71    
72    checkpoint54c_post
73  o replace surfaceTendency U,V,S,T,Tice,Ptr by surfaceForcing U,V,S,T,Tice,Ptr  o replace surfaceTendency U,V,S,T,Tice,Ptr by surfaceForcing U,V,S,T,Tice,Ptr
74    this affects (truncation error) output.txt of test-exp:    this affects (truncation error) output.txt of test-exp:
75     global_ocean_ebm,_pressure,.cs32x15(&.thsice), lab_sea & natl_box     global_ocean_ebm,_pressure,.cs32x15(&.thsice), lab_sea & natl_box

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