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revision 1.222 by dimitri, Wed Dec 10 19:37:25 2003 UTC revision 1.263 by dimitri, Tue Mar 2 08:45:46 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    o moved SEAICE_DO_DIAGS to S/R do_the_model_io
7    o bug fix for pkg/seaice pickups
8    o change MNC call locations and add coordinate attributes
9    o mask vorticity at the corner ; affects global_ocean.cs output
10    o fix ini_curvilinear_grid ; test CS experiments with mpi
11    o aim.5l_cs: modify sea-ice fraction input file ; update output
12    o exf: Adding simple range check routine for exf fields after read
13    
14    checkpoint52k_post
15    o removed top-level directory "diags"
16      - we migrated these functions to pkg/timeave a long time ago
17    o fixed bug introduced in pkg/monitor
18    o accuracy ctrlprec = 32 insuffient for gradient checks using
19      averaged fields (I/O via cost_averages)
20      -> use ctrl.h in active_file*.F to control I/O precision.
21    o paramter list of CALL ADTHE_MAIN_LOOP
22    o added initial do_the_model_io to ecco
23    o set all ...Freq to zero after cost_final
24      taveFreq, dumpFreq, pChkptFreq
25    o MAIN and ECCO differentiability restored
26    
27    checkpoint52j_post
28    o fix nchklev in tamc.h for global_ocean...
29    o Bringing flow and store directives up-to-date
30    o Really weird thing!
31      call do_the_model_io from the_main_loop with parameters
32      starttime, niter0, instead of mytime, myiter, screws up the adjoint:
33      TAF places a faulty re-call of initialise_varia
34      after cost_final call which should not be there!
35    checkpoint52j_pre
36    
37    o tweaked pkg/mdsio/mdsio_readfield.F to have more useful logic and
38      error messages
39    o fix errorMessageUnit problem. remove old version of mdsio from eesup/src
40    o modified pkg/mdsio/mdsio_readfield.F -- commented out diskspace-eating
41      debug output
42    o modfied mdsio_writefield.F to handle non-global files under exch2
43    o update AIM Cubed-Sphere exp (aim.5l_cs):
44      use land, p*, and Franco.M forcing fields with fractional land-sea mask.
45    o update AIM Equatorial Channel exp:
46      use standard aim_v23 pkg and change the SST fields to be more realistic.
47    o globalFile now works with exch2
48    o merged mom_vi_calc_relvort3.F, mom_vi_del2uv.F and
49      mon_vort3.F to make exch2 friendly with >1 tile per cube face
50    o limit timeave output for hi-res integrations
51    
52    checkpoint52i_post
53    o removed CPP_EEOPTIONS.h from verification/*/code
54    o updated the tiling for global_ocean_pressure
55    checkpoint52i_pre
56    
57    o update aim.5l_LatLon using the standard aim_v23 pkg (instead of
58      the old pkg/aim).
59    
60    checkpoint52h_pre
61    o shortened offending lines in exch2_send_rx?.template
62    o modified W2_EXCH2_TOPOLOGY.h to reflect current topology generator
63    o genmake2: add build & execute test for NetCDF code
64    o modded aim.5l_cs and global_ocean.cs32x15 to use exch2, removed
65      old grid files, moved CPP_EEMACROS.h to pkg/exch2
66    o added useSingleCPUIO flag to monitor.F and mon_out.F
67    o added temporary hack for sea-ice dynamics on the cube:
68      metric terms are ignored and it is assumed that
69      there is no sea-ice on cube faces 1, 2, 4, and 5.
70    
71    checkpoint52f_post
72    o added exch2 cube routines to pkg/exch2
73    o modified hs94.cs-32x32x5 to use it
74    o added new grid files to hs94.cs-32x32x5
75    checkpoint52f_pre
76    
77    checkpoint52e_post
78    o first attempt to solve vertical advection (momemtum & T,S) Implicitly
79      for now, only implemented with Lax-Wendroff (tracer) and VectInv (mom)
80    o step.1 : rewrite (as in MultiDimAdvec) explicit tracer stepping (gad_calc_rhs.F)
81      to work with implicit vertical advection and AB ;
82    o Implic. vert. advect. implemented with flux-limiter, c2, u3 and c4 scheme.
83    o update output (gad_calc_rhs.F changes affect truncation error) of exp:
84     front_relax, global_ocean .cs32x15 & _pressure, internal_wave, lab_sea, natl_box
85    checkpoint52e_pre
86    
87    o fix bug in impldiff when Nr=1 or Nr=2.
88    o change the albedo in pkg/thsice (as GISS model); update output_thsice.txt
89    o little changes (fftpack, aim/phy_suflux ...) to pass the "checkbounds" test.
90    o fix deltaTfreesurf in update_cg2d.F (left from c45d_post): affects 2
91      ocean exp. that use NLFS: global_ocean.cs32x15 & global_ocean_pressure
92    o added exf_offset_atemp for Celsius to Kelvin conversion of atemp
93    o eesupp/inc/EEPARAMS.h: MAX_NO_PROCS=1024
94    o pkg/cal/cal_toseconds.F fix for long (>60 years) integrations
95    
96    checkpoint52d_post
97    o re-tiled many expts to allow comparison in multi-processor mode
98      - updated output accordingly
99      - changed hs94.128x64x5 to use intial T from file rather than use the
100        random number generator
101    o add infrastructure in model routines for fizhi and gridalt packages
102  o change global_ocean.cs32x15 because of Pb with GM on CS-grid.  o change global_ocean.cs32x15 because of Pb with GM on CS-grid.
103  o changes to permit hi-res, cubed-sphere, configuration  o changes to permit hi-res, cubed-sphere, configuration
104    - added useSingleCpuIO capability to mdsio_readfield.F and exf_interp.F    - added useSingleCpuIO capability to mdsio_readfield.F and exf_interp.F
# Line 14  o changes to permit hi-res, cubed-sphere Line 110  o changes to permit hi-res, cubed-sphere
110     Gaussian grid is described in MITgcm_contrib/high_res_cube/README_ice,     Gaussian grid is described in MITgcm_contrib/high_res_cube/README_ice,
111     complete with example surface forcing files and matlab scripts to look     complete with example surface forcing files and matlab scripts to look
112     at the output and compare it with that of global_ocean.cs32x15.)     at the output and compare it with that of global_ocean.cs32x15.)
113    o packages pickup: $PKG_write_pickup called from packages_write_pickup ;
114       but call to $PKG_read_pickup remains in $PKG_ini_vars: change CD_code
115       to conform to the common rule.
116    o check-in the first version of the coupler + interfaces for multi-components
117       set-up (Chris's version, adapted to work on cubed-sphere grid); use MPI.
118       - imply modification in eesupp (MPI_COMM_MODEL < MPI_COMM_WORLD).
119       - atmosphere: use pkg aim_v23 ; no sea-ice for now.
120       - ocean and atmos. share the same horizontal grid (no interpolation).
121       - exchanges between component and coupler is done in forward_step
122    o new verification experiment, cpl_aim+ocn:
123       coupled ocean - AIM atmosphere on cs32 grid.
124    
125  checkpoint52d_pre  checkpoint52d_pre
126  o surface flux time-av diagnostic modified for NLFS & RealFreshWater  o surface flux time-av diagnostic modified for NLFS & RealFreshWater

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