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revision 1.607 by mlosch, Fri Feb 10 07:56:43 2006 UTC revision 1.648 by heimbach, Sun Apr 9 17:36:48 2006 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o thsice adjoint: start
8    o mom_vecinv: add ISOTROPIC_COS_SCALING flags to mom_vi_hdissip for
9      completeness
10    o mom_fluxform: fixing the mutual use of ISOTROPIC_COS_SCALING
11      and COSINEMETH_III, add comments in default CPP_OPTIONS.h
12    o ptracers adjoint:
13      * avoid extensive recomputatations
14      * fix missing re-init. of gptr (missed by TAF)
15    o obcs: add a flag (OBCSprintDiags, defaults is true) that allows
16      me to turn off the excessive output to STDOUT that this package produces
17    o move NH metric terms & 3.D Coriolis S/R to pkg/mom_common
18      and add those terms in Vector-Invariant formulation.
19    o in ctrl pkg, if ALLOW_CAL, use monthly mean controls
20      if the control period (xx_hfluxperiod etc) is 0
21    o in profiles pkg, clean routines and fix details
22    o in ecco pkg, reading ssh data:
23      fix problem in case the model does not start at iter0=0
24    o fix mnc-pickup/restart for ptracers
25    o new package prifiles:
26      code to compute profile-based cost by Gael Forget
27      (modifs in ecco, ctrl, autodiff)
28    o Benign bug fix in initialization (spotted by M. Mazloff) of
29      ctrl_set_globfld_xz.F ctrl_set_globfld_yz.F
30    
31    checkpoint58c_post
32    o adjoint: finish NLFS adjoint and provide reference output in
33      verification/global_ocean.90x40x15/results_ad_nlfs
34    o seaice: add an EVP solver following Hunke and Dukowicz (1997) and the
35      documentation of CICE. Turn on by defining SEAICE_ALLOW_EVP in
36      SEAICE_OPTIONS.h and SEAICEuseEVP=.true. in data.seaice. Works only
37      with SEAICE_CGRID defined.
38    o move calendarDumps from "data" to "data.cal" and clean-up the code
39      with a simple call to pkg/cal S/R: CAL_TIME2WRITE
40    o add useEXF & useCAL flags (for now, set in hard-coded way)
41    o add S/R to compute NH-metrics terms & Coriolis f' in vertical momentum
42      (were missing in NH mode, and wrong in quasihydrostatic mode).
43      waiting for Chris updated version of calc_gw to add those CALLs.
44    o fix bug in quasihydrostatic S/R ;
45      add a test for this option: global_ocean.90x40x15.qshyd
46    o new S/R "SET_PARMS": set parameters that might depend on the use of some pkgs.
47      (called from INITIALISE_FIXED, after INI_PARMS & PACKAGES_READPARAMS)
48    o add on/off flag useOffLine for package OFFLINE
49    o seaice:
50      - modify advection so that it works also on the C-grid
51      - extend loop ranges in seaice_lsr and seaice_dynsolver; fixes
52        problem in multi-tile runs with C-grid
53      - add flags for clipping ice velocities and/or masking solver forcing
54      - fix drag (ocean on ice) formulation and a bug that caused noise in the
55        C-grid solver
56      - added a few comments to seaice_diffusion.F
57      - separate C-grid and B-grid versions more cleanly (UVM and seaiceMaskU/V
58        are now exclusive)
59      - add a new ocean-ice stress coupling method (Hibler and Bryan, 1987) which
60        required re-ordering the code a little:
61       + make DAIRN global variable (defined in SEAICE)
62       + move computation of the viscosities eta and zeta into a new separate
63         routine (because I need to recompute them in seaice_ocean_stress.F)
64    
65    checkpoint58b_post
66    o AIM+thSIce: fix sign of Short-Wave through the Ice ;
67      update output.txt of exp. aim.5l_cs.thSI
68    o various mnc cleanups and improvements:
69      + shrink lookup tables by factor of ~4
70      + better error reporting when running out of lookup space
71      + able to handle longer path/file names (up to 500 chars)
72    o adjoint:
73      - Another overhaul of store dirs. for NLFS to eliminate  "hidden" recomputations.
74      - TBD: "hidden" mom_vecinv recomp. in dynamics
75    o change forcing_In_AB to affects both T,S forcing and Momentum forcing
76     (allow to differentiate between forcing components using new integer flags:
77      momForcingOutAB=1/0 & tracForcingOutAB=1/0)
78     and add new flag to put Dissipation tendency out of Adams-Bashforth.
79    o ecco
80      - enable trend removal from SSH anomaly obs.
81    o adjoint
82      - a fix for PmEpR when #undef EXACT_CONSERV
83      - fix of "hidden" recomp. in thermodynamics (no TAF warnings)
84      - try to fix "hidden" recomp. in forward_step for NLFS
85        (NLFS seems broken sometimes after I checked it in)
86    o seaice:
87     - add c-grid version of the dynamic solver:
88       + three new routines that are the c-grid substitute lsr, dynsolver
89         and ostres
90       + put a few fields that were local to dynsolver into global common
91         blocks, so that I can move the computation of stresses etc into
92         seaice_lsr (saves coding but may break the adjoint).
93     - replace more hardwired parameters by runtime parameters
94     - add ice masks that mask the rhs of the implicit solvers where there
95       is no ice (commented out in seaice_dynsolver, because i am not sure
96       if this works properly), eventually this should replace the clipping
97       of ice velocities in seaice_dynsolver to +/-40cm/s.
98    o remove the BUILD_INFO.h include from CPP_EEOPTIONS.h and explicitly
99      include it only where its needed
100    o move balancing of fluxes before the call of external_forcing_surf
101    o seaice:
102      - correct units of turning angles (now they are really in degrees)
103      - move computation of GWATX/Y out of main routine into dynsolver
104      - initialize GWATX/Y in seaice_init
105    o Apply mask on Fresh-Water flux (needed for SSH forcing).
106      update output.txt of exp. global_ocean_ebm & cpl_aim+ocn (affects cg2d residual)
107    o seaice: add runtime flags for turning angles (default to zero)
108    o Adding runtime parameter to exf/, ctrl/, to remove on-the-fly global mean
109      and trend from exf forcing and ctrl control adjustments
110    o fix variable aliasing in gad_calc_rhs that cannot be handled by TAF
111      (since checkpoint57x_post)
112    o change the default rotation period to 86164.s = the Earth rotation
113    o 1rst implementation of Implicit IGW using the 3-D solver (use3Dsolver=T)
114      and based on a reference stratification. Tested within hs94.cs-32x32x5.
115    o seaice advection: add code for choosing between the default (2nd order
116      central differences) and multiDim advection schemes provided by
117      pkg/generic_advdiff
118    o seaice:
119      - removed all references to SEAICE_GRID.h fields from
120        dynsolver, advect, diffus, lsr, without changing the results of lab_sea
121        (cubed-sphere configuration will change a little)
122      - grid computations in seaice_init are obsolete now.
123      - cleaned up code a little so that is easier to read (hopefully).
124      - added new (better?) discretizations of default advection and diffusion
125        (turn on with SEAICEuseFluxForm)
126      - replace 1 in 3d global fields by kSurface in growth.F
127      
128    checkpoint58a_post
129    o seaice:
130      - bug fix in advect.F
131    o shelfice:
132      - separate shelfice load anomaly from pload (breaks with time
133        dependent forcing), => introduce constant field shelficeLoadAnomaly.
134        Its default is 0., but it may be computed more cleverly from (unknown)
135        t- and s-profiles (tRef, sRef) and actual EOS. For now this has to be
136        done offline. A good approximation of the pressure load anomaly is
137        necessary to avoid large initial adjustment processes underneath
138        deep-reaching shelfice.
139      - small fix in ISOMIP shelfice_thermodynamics
140      - add more sophisticated thermodynamics of Hellmer (1989), this is
141        now the default
142      - give a few constants more intuitive names
143  o add code to balance EmPmP and Qnet at the end of do_ocean_physics. Useful  o add code to balance EmPmP and Qnet at the end of do_ocean_physics. Useful
144    if bulk formulae are used in long integration (especially EmPmR). Turn    if bulk formulae are used in long integration (especially EmPmR). Turn
145    on with balanceEmPmR = .true. or balanceQnet = .true. in data, PARM01    on with balanceEmPmR = .true. or balanceQnet = .true. in data, PARM01
# Line 19  o add a new package shelfice which enabl Line 155  o add a new package shelfice which enabl
155            + can we use topoFile, Ro_surf and existing code in ini_depth.F            + can we use topoFile, Ro_surf and existing code in ini_depth.F
156              instead of new field R_shelfIce and new code in ini_depth.F              instead of new field R_shelfIce and new code in ini_depth.F
157              and ini_mask_etc.F?              and ini_mask_etc.F?
158              + adjust vertical mixing schemes?
159  o seaice pkg:  o seaice pkg:
160   - add a cpp-flag to include a simple formula for a salinity dependent   - add a cpp-flag to include a simple formula for a salinity dependent
161     freezing point of sea water at the surface     freezing point of sea water at the surface

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