1 |
$Header$ |
$Header$ |
2 |
|
$Name$ |
3 |
|
|
4 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
5 |
============================== |
============================== |
6 |
|
|
7 |
|
o in mnc, let the user create the output dir if both mnc_outdir_date |
8 |
|
and mnc_outdir_num are false |
9 |
|
o add fflags() to pkg/diagnostics which allows one to specify, on a |
10 |
|
per-file basis, the file precision [default behavior is unchanged] |
11 |
|
o added diagnostics to pkg/kpp, including computation of mixed layer |
12 |
|
depth based on a temperature/density criterion |
13 |
|
o updated verification/natl_box to test the new pkg/kpp diagnostics |
14 |
|
o bugs fixed (with useAbsVorticity=T & with useJamartMomAdv=T) |
15 |
|
o test AB-3 code with 4th.Order advection scheme (advect_xy/input.ab3_c4) |
16 |
|
o fix mnc flags in pkg/seaice so that they are "owned" by seaice, |
17 |
|
not mnc -- this mistake was found by JMC and is now corrected |
18 |
|
|
19 |
|
checkpoint57g_post |
20 |
|
o add Adams-Bashforth 3rd Order time stepping: |
21 |
|
- default remains AB-2 (#undef ALLOW_ADAMSBASHFORTH_3) |
22 |
|
- not yet implemented with NH, CD_Scheme, pTracers, MNC_pickup ... |
23 |
|
checkpoint57g_pre |
24 |
|
|
25 |
|
o make lambda[Theta,Salt]ClimRelax spatially varying |
26 |
|
(default remains spatially uniform constant based on tau) |
27 |
|
o added new control variables |
28 |
|
* init. uVel, vVel, etanN |
29 |
|
* lambda[Theta,Salt]ClimRelax |
30 |
|
o separate masks used for ctrl_pack/unpack 'from write_grid' output |
31 |
|
(suggested by G. Forget) |
32 |
|
|
33 |
|
checkpoint57f_post |
34 |
|
o add parameter "baseTime" = model base time = time at iteration zero |
35 |
|
new function DIFF_BASE_MULTIPLE (replace DIFFERENT_MULTIPLE) to |
36 |
|
account for baseTime shift |
37 |
|
o move Coriolis arrays from PARAMS.h to GRID.h |
38 |
|
checkpoint57f_pre |
39 |
|
|
40 |
|
o mnc-ifying the seaice package |
41 |
|
o introduced an alternative length scale calculation for use in the limiting |
42 |
|
maximum viscosity (off by default, see mom_vi_hdissip.F for details) |
43 |
|
o S/R ptracers_calc_diff: argument list bug for CALL KPP_CALC_DIFF_S |
44 |
|
o added modified Leith scheme with viscosity proportional to grad(Hdiv) |
45 |
|
as well as grad(vort3). Made it compatible with both approximate form |
46 |
|
for the cubed sphere and full form of these gradients. Added flag |
47 |
|
useFullLeith to select between approximate and full form. |
48 |
|
o add "d0" in getcon.F to reduce differences between compilers/platforms |
49 |
|
update output.txt of exp. fizhi-gridalt-hs |
50 |
|
o change port_rand funtion to allow to set the seed. |
51 |
|
o fix obscure MNC bug involving conversion between reals and integers |
52 |
|
- it caused no problems with certain (eg. gcc, ifc) compilers but the |
53 |
|
new version is now more standards-compliant |
54 |
|
o adjoint-related modifications |
55 |
|
* gad_dst3_adv_?: to be able to use advscheme=30 in adjoint |
56 |
|
* gad_calc_rhs: fool adjoint, revert to advscheme=30 in reverse when using 33 |
57 |
|
* mom_vi_hdissip: to be able to use Leith scheme in adjoint |
58 |
|
|
59 |
|
checkpoint57e_post |
60 |
|
o Adding eddy stress controls a la Ferreira et al. |
61 |
|
checkpoint57e_pre (actually was tagged: eckpoint57e_pre) |
62 |
|
|
63 |
|
o fizhi pkg: fix AtoC and CtoA when called with same input & output array |
64 |
|
update output.txt of exp. fizhi-gridalt-hs |
65 |
|
o add more "Z" dimensions and associated coordinate vars to MNC |
66 |
|
o pkg/exf: added twoDigitYear capability for option useExfYearlyFields |
67 |
|
o parameter calendarDumps: when set, approximate months (30-31 days) and years |
68 |
|
(360-372 days) for parameters chkPtFreq, pChkPtFreq, taveFreq, SEAICE_taveFreq, |
69 |
|
KPP_taveFreq, and freq in pkg/diagnostics are converted to exact calendar |
70 |
|
months and years. Requires pkg/cal. |
71 |
|
o diagnostics: add pickup functionality |
72 |
|
- off by default for backwards compatibility |
73 |
|
- current version only uses MDSIO -- MNC will be added |
74 |
|
o allow to use pkg diagnostics for LAND pkg output & Shapiro Tendencies. |
75 |
|
o pkg/shap_filt: fix for multi-tiles per face (CS-grid with EXCH2) |
76 |
|
|
77 |
|
checkpoint57d_post |
78 |
|
o pkg/thsice used in the ocean: fix tile Pb related to sIceLoad forcing |
79 |
|
o modify verification/ideal_2D_oce so that it tests the creation of mnc |
80 |
|
output from the diagnostics package |
81 |
|
o temporary fix in EXCH2_UV: add a 3rd call to fix the 24.tiles CS-grid set-up |
82 |
|
o make genmake2 more portable by using ".$FS" instead of ".f" for more |
83 |
|
of the test compilations (eg. IBM xlf on Mac OSX w/HFS filesys) |
84 |
|
o add coordinate variables to the MNC output from the diagnostics package |
85 |
|
o change MNC-flags default value: true when useMNC=TRUE |
86 |
|
o add a "readgrid_mnc" flag to MNC and give model/src/ini_curvilinear_grid.F |
87 |
|
the ability (off by default) to read the grid information using MNC |
88 |
|
o lab_sea: use LSR_ERROR=1.E-12 for testing ; update output.txt |
89 |
|
o diagnostics: fix a bug (sub-set of levels); keep full precision when averaging |
90 |
|
o do snap-shot diagnostics at the middle of the time-interval (instead of |
91 |
|
at the end). |
92 |
|
o update exp. aim.5l_cs (use default LAND_OPTIONS.h file) and add |
93 |
|
new test for AIM with thSIce + slab-ocean |
94 |
|
o cpl_aim+ocn test: update output (optfile & default GMREDI_OPTIONS.h) |
95 |
|
o move state variable diagnostics to the beginning of the time step ; |
96 |
|
(note: still needs some work specially for snap-shot diagnostics) |
97 |
|
duplicate & replace UVELVVEL diagnostics with UV_VEL_C & UV_VEL_Z |
98 |
|
|
99 |
|
checkpoint57c_post |
100 |
|
o Change testing option (-ieee) to get closer agreement between g77 & ifort |
101 |
|
o generate new output.txt files on faulks with g77 & the new -ieee option |
102 |
|
checkpoint57c_pre |
103 |
|
|
104 |
|
o add "_d 0" in freeze ; change some "FLOAT" to "DFLOAT" and went back (TAF); |
105 |
|
update output.txt of exp. global_ocean.90x40x15 |
106 |
|
o fix in ini_eos.F (one "_d 0" was missing): now g77 & ifc give much closer |
107 |
|
results; update global_ocean_pressure & global_ocean.cs32x15 output.txt |
108 |
|
o add saltFlux(+File) forcing capability with periodicExternalForcing |
109 |
o allow to use pkg diagnostics for GM-Redi & ThSIce output |
o allow to use pkg diagnostics for GM-Redi & ThSIce output |
110 |
o diagnostics_fill: fill in up to sNx+1 or sNy+1 (if U,V or Z pt) for mnc. |
o diagnostics_fill: fill in up to sNx+1 or sNy+1 (if U,V or Z pt) for mnc. |
111 |
o improvements for the MNC output from DIAGNOSTICS: |
o improvements for the MNC output from DIAGNOSTICS: |
122 |
fields (remains bicubic for wind velocity and stress). This avoids, e.g., |
fields (remains bicubic for wind velocity and stress). This avoids, e.g., |
123 |
spurious negative numbers for precipitation and humidity. Will cause |
spurious negative numbers for precipitation and humidity. Will cause |
124 |
some small numerical differences for integrations using pkg/exf/exf_interp.F. |
some small numerical differences for integrations using pkg/exf/exf_interp.F. |
125 |
|
o pkg/ctrl/ |
126 |
|
* Add ctrlvec diagnostics in pack/unpack for nondimensional I/O |
127 |
|
May be enabled via doPackDiag |
128 |
|
* introduce z-scaling of |
129 |
|
+ gradient (doZscalePack) and |
130 |
|
+ control (doZscaleUnpack) |
131 |
|
o pkg/mdsio/ |
132 |
|
* enable useSingleCpuIO for state estimation (ctrl_pack/unpack) mdsio_gl.F |
133 |
|
* N.B.: leave tiled I/O for tapelev (i.e. mds...vector) |
134 |
|
|
135 |
checkpoint57b_post |
checkpoint57b_post |
136 |
o simplify options in diagnostics_fill arguments (remove weird combinations) |
o simplify options in diagnostics_fill arguments (remove weird combinations) |