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revision 1.283 by mlosch, Wed Apr 28 12:01:30 2004 UTC revision 1.313 by jmc, Fri Jun 25 19:49:14 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6  o replaced all occurrences of 1/CSTICE or 1/CSUICE  checkpoint53f_post
7    - they caused a segmentation fault under certain circumstances  o modifications that affect AIM experiment results (update output.txt):
8      - no advection of S at top interface Nr (pkg/generic_advdiff)
9      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
10    o AIM pkg:
11      - include stability function into surf.Flux derivative relative to Tsurf
12      - calculate clear-sky radiation & surface temp. change (for diagnostics)
13    
14    checkpoint53e_post
15    o merged cylindrical coord configuration
16    o added rotating_tank experiment
17    checkpoint53e_pre
18    
19    checkpoint53d_post
20    o faulks upgraded: re-generate output.txt that have changed:
21       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
22    o Added Bryan and Lewis, 1979, vertical diffusivity profile
23    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
24    o added Sadourny discretization of Coriolis
25      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
26      - re-enabled use of omega3 (useAbsVorticity)
27    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
28      vector-invariant equations
29      - note: does *NOT* yet use same variable visc. for no-slip BC's.
30    o recoded the lateral boundary conditions for non-hydrostatic w, this time
31      hopefully without new bugs
32      - still to do: biharmonic friction for non-hydrostatic w
33    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
34    o regenerated output for global_ocean_ebm (using -ieee)
35    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
36      of mom_common/
37      - simple re-arrangement of instructions within computing loop
38    checkpoint53d_pre
39    
40    checkpoint53c_post
41    o new version of coupler for AIM+thSIce and Ocean models
42     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
43     - land: change Evaporation of snow
44     - aim with thSIce: fix bug in snow-precip.
45    o changes to calc_gw.F
46     - bug fix for w^2 term near the bottom boundary
47     - (hopefully) improve the lateral slip boundary condtions for use with
48        partial/looped cells
49      - because the bug fix changes two verification experiments anyway (exp5
50        and plume on slope), change the lateral boundary condition from half slip
51        to the value of no_slip_sides
52    o ebm package wasnt quite up to the parallel task. Fixed that.
53    o Adjoint of EBM package + verification
54      * TLM OK
55      * ADM not sufficient accuracy yet (needs further testing)
56    
57    checkpoint53b_post
58    o Commiting new energy balance model to repository
59      * package is pkg/ebm
60      * verif. is verification/global_ocean_ebm
61      * references are in ebm_driver.F
62    C      * X. Wang, P. Stone and J. Marotzke, 1999:
63    C        Global thermohaline circulation. Part I:
64    C        Sensitivity to atmospheric moisture transport.
65    C        J. Climate 12(1), 71-82
66    C      * X. Wang, P. Stone and J. Marotzke, 1999:
67    C        Global thermohaline circulation. Part II:
68    C        Sensitivity with interactive transport.
69    C        J. Climate 12(1), 83-91
70    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
71    C        Destabilization of the thermohaline circulation
72    C        by atmospheric eddy transports.
73    C        J. Climate 7(12), 1870-1882
74    o Will need long integration testing.
75    checkpoint53b_pre
76    
77    o created pkg/mom_common in preparation for variable viscosity code
78    o renamed and split ini_mnc_io
79    o pkg/land: only liquid water can diffuse or run-off
80    o AIM using land: soil wetness availability account for snow
81    o added printMapIncludesZeros to EEPARMS namelist
82    
83    checkpoint53a_post
84    o restore TAMC compatiility for exf_constants.h
85      (no usage of _d in .h)
86    o Additional storing in KPP in an attempt to fix
87      TAMC problem with adjoint of KPP code.
88      (no success...)
89      Identical code works fine with TAF.
90    o Fixed verification/natl_box_adjoint experiments.
91      Initial conditions for Experiments 4 and 5 are now
92      set to "SEAICE_initialHEFF=0", which is more reasonable,
93      and hence gives results closer to that of Experiment 2.
94      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
95    
96    checkpoint53
97    o stable checkpoint with up to date adjoint
98      TLM tests only run for 1st grdchk at the moment. Its unclear if
99      this is a code problem or a problem with resetting code for g_
100      variables that is being autogenerated wrong.
101      Otherwise:
102       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
103       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
104         are both still in chaos following their security messes.
105    
106    checkpoint52n_post
107    o various build (mostly genmake2) changes including:
108      - ability to build/run more easily within Cygwin and MacOS X
109      - more complicated Makefiles with a stronger dependence on Gnu Make
110    o pkg/seaice modifications
111      - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
112        of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer
113        and SEAICE_deltaTdyn must be integer multiple of SEAICE_deltaTtherm
114      - changed proxy for geostrophic velocity and updated
115        verification/lab_sea/results/* accordingly
116      - removed ADI dynamic solver from pkg/seaice
117      - replaced all occurrences of 1/CSTICE or 1/CSUICE
118        they caused a segmentation fault under certain circumstances
119    - removed unused field WATR    - removed unused field WATR
120  o bug fix in exf-package:  o bug fix in exf-package:
121    -  u/vwind are defined at tracer/pressure points. The values of u/vwindmask    -  u/vwind are defined at tracer/pressure points. The values of u/vwindmask

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