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revision 1.406 by mlosch, Thu Dec 9 09:03:32 2004 UTC revision 1.417 by jmc, Fri Dec 17 05:03:43 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    o pkg/thSIce: read initial state from 6 files ; allow monitor to use MNC.
7    o add diagnostics of advective & diffusive flux for T & S (pTracers coming soon)
8      this is based directly on what the model compute, so that the content of
9      each diagnostics might be affected by switching options (e.g., implicitDiffusion)
10    o small changes for diagnostics (gad_biharm_?.F, arguments of S/R impldiff.F)
11    o clean up build options files for SunOS, in particular
12      - remove -traditional from xmakedepend
13      - change -xarch=v9 to -xarch=native for f77
14      - restore use of make (not gmake)
15      - add CC=gcc if using g77
16    o changes per discussion of AM, JMC, & EH3 today:
17      - move redundant "grid" variables out of "state" -- in preparation of
18        creating proper CF-style coordinate variables and in recognition
19        that any/all grid variables can be easily copied (eg. w/NCO) from
20        the grid files into any of the other NetCDF files
21      - *always* output grid variables with MDSIO (this will eventually be
22        changed)
23      - output MNC grid file if useMNC is true
24    o every instance of _END_MASTER() has been found and replaced with
25      _END_MASTER( myThid ) in order to satisfy certain picky Sun
26      preprocessors
27    o re-arrange diagnostics pkg initialisation:
28     - allow each package to extend the available diagnostics list
29     - add some checking and fix small problems (multi-threaded, ...)
30     - new S/R diagnostics_fill (replace fill_diagnostics):
31       look through the short list of active diag. (instead of the long list)
32       create function DIAGNOSTICS_IS_ON to tell if a diagnostics is active
33    
34    checkpoint57a_post
35    o this set of changes restores TAMC compatibility
36      tested for global_ocean.90x40x15 adjoint on trough
37      (what a pain)
38    
39    checkpoint57a_pre
40    o some modifs in tools/build_options for sunos
41    o call ctrl_pack for ctrl at end for optimcycle=0
42    
43    checkpoint57
44  o add horizontal bi-harmonic viscosity for vertical velocity  o add horizontal bi-harmonic viscosity for vertical velocity
45    - new parameter viscA4W (defaults to viscA4)    - new parameter viscA4W (defaults to viscA4)
46    - affects only non-hydrostatic code    - affects only non-hydrostatic code
# Line 17  o add call monitor to TAF set of require Line 55  o add call monitor to TAF set of require
55    and include in natl_box_adjoint    and include in natl_box_adjoint
56  o untangle a few ifdefs related to cost, ctrl, autodiff  o untangle a few ifdefs related to cost, ctrl, autodiff
57    untangel a few ALLOW_ECCO_OPTIMIZATION    untangel a few ALLOW_ECCO_OPTIMIZATION
58    o Apply Cooper & Haines representative estimates also at sub-surface (k=Nr)
59      (theta2, salt2 in ecco_cost_weights)
60    
61  checkpoint56c_post  checkpoint56c_post
62  o OBCS as control variables  o OBCS as control variables
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