3 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
4 |
============================== |
============================== |
5 |
|
|
6 |
|
o argument futureIter of S/R obcs_calc missing in exp4 & internal_wave /code |
7 |
|
o solve_for_pressure : set cg2d_x to zero where OBCS are applied |
8 |
|
|
9 |
|
checkpoint44h_post = checkpoint45 |
10 |
|
o Fix to restore differentiability: |
11 |
|
place at which packages_init_variables is called in |
12 |
|
initialise_varia is crucial for reverse control flow. |
13 |
|
o modifications in GMRedi to enable stable adjoint |
14 |
|
(corresponding modif's in thermodynamics, dynamics) |
15 |
|
o added missing hook for sponge layer code in external_forcing |
16 |
|
o modified test cost functions |
17 |
|
o storing in gad_advection (plus removal of write(0,*)! |
18 |
|
o missing headers TR1.h added in convective_adjustment routines |
19 |
|
o errorMessageUnit set non-equal zero in eeboot |
20 |
|
(conflict on some platforms, e.g. IBM SP3) |
21 |
|
o modified carbon verif. |
22 |
|
|
23 |
|
checkpoint44h_pre |
24 |
|
o vertical grid option: allow to put the Interface at the middle between |
25 |
|
2 cell-centers ; replace delZ in pkg/kpp by drF. |
26 |
|
o GM Advective form: Tracers are advected using the residual transport (= |
27 |
|
Euler+GM-bolus); set param GM_AdvSeparate=T to return to previous form. |
28 |
|
|
29 |
|
checkpoint44g_post |
30 |
|
o fix surface correction term in multiDimAdvection (affects plume_on_slope |
31 |
|
results) ; ifdef missing in thermodynamics.F |
32 |
|
|
33 |
|
checkpoint44f_pre,checkpoint44f_post |
34 |
|
o added PTRACERS package |
35 |
|
This allows an arbitrary number of passive tracers to be integrated |
36 |
|
forward simultaneously with the dynamicaly model. |
37 |
|
+ Implemented so far: |
38 |
|
- basic forward algorithm (time-stepping, advection, diffusion, convection) |
39 |
|
- I/O and checkpointing |
40 |
|
- GM/Redi *but* using the GM/Redi coefficient of Salt |
41 |
|
+ Not implemented so far: |
42 |
|
- KPP |
43 |
|
- OBCS |
44 |
|
+ No specific example supplied (yet) but global_ocean.90x40x15 has the |
45 |
|
necessary data.ptracer file. Simply use -enable=ptracers and uncomment |
46 |
|
line in data.pkg. |
47 |
|
+ This package is disabled by default since it increases storage. |
48 |
|
|
49 |
|
|
50 |
|
o testscript: added -cleanup option |
51 |
|
o Shap_filt: a) new shap_filt S/R to use no-slip BC with S2 filter |
52 |
|
b) enable to filter 2D fields. |
53 |
|
|
54 |
|
checkpoint44e_pre,post |
55 |
|
o re-wrote convective adjustment to use pre-calculated weights |
56 |
|
Affects: model/src/convective_adjustment.F, convective_adjustment_ini.F |
57 |
|
Adds: model/src/convective_weights.F, convectively_mixtracer.F |
58 |
|
Original calls to convect() still in place. |
59 |
|
|
60 |
|
chkpt44d_pre,post |
61 |
|
o added missing EXCLUDE_MONITOR flags |
62 |
|
o changed "e" to "_d" in gmredi_slope_limit, gmredi_slope_psi |
63 |
|
(incompatible typ in MIN/MAX expressions caused problems |
64 |
|
on IBM SP3) |
65 |
|
o in genmake added variable MAKEDEPEND |
66 |
|
plus resetting for case SunOS |
67 |
|
o added timer_stats.c routine for IBM SP3 |
68 |
|
o removed variables in dynamics |
69 |
|
!!! I forgot to create tag chkpt44d_pre !!! |
70 |
|
!!! But chkpt44d_pre = chkpt44c_post !!! |
71 |
|
|
72 |
|
o real fresh water flux implemented with non-linear free-surface. |
73 |
|
|
74 |
|
chkpt44c_pre,post |
75 |
|
o few fix (mask in shap_s2, EmPmR in external_field_load, |
76 |
|
USE_NATURAL_BCS in solve_for_P); |
77 |
|
o add arguments myIter & myTime to S/R obcs_calc & solve_for_P |
78 |
|
|
79 |
|
checkpoint44b_pre/_post |
80 |
|
o merge of relevant stuff from the ecco-branch: |
81 |
|
- genmake: removed $S64 overwrite for case SunOS |
82 |
|
- pkg/exf: update and corrections for field swapping and obcs |
83 |
|
- pkg/ecco: parameter lists for the_model_main, the_main_loop |
84 |
|
harmonized between ECCO and MITgcm |
85 |
|
- pkg/autodiff: added flow directives for obcs, mdsio_gl_slice |
86 |
|
updated checkpointing_lev... lists for obcs |
87 |
|
- model/src: minor changes in forward_step, plot_field |
88 |
|
added directive for divided adjoint in the_main_loop |
89 |
|
- pkg/mdsio: added mdsio_gl_slice |
90 |
|
|
91 |
|
o check parameters & config (chkpt44a_pre,post) |
92 |
|
o OBC and NonLin_FrSurf. |
93 |
|
|
94 |
|
checkpoint44 |
95 |
|
o fix bug in mom_vi_del2uv |
96 |
|
o select when filters are applied ; add options to zonal_filter (data.zonfilt) |
97 |
|
o gmredi: fix Pb in the adiabatic form ; add options (.e.g. Bolus advection) |
98 |
|
o update AIM experiments (NCEP input files) |
99 |
|
o improve and extend diagnostics (Monitor, TimeAve with NonLin-FrSurf) |
100 |
|
o added some stuff for AD |
101 |
|
|
102 |
checkpoint43 |
checkpoint43 |
103 |
o added two new advection tests |
o added two new advection tests |
104 |
o added global 4x4 degree ocean test |
o added global 4x4 degree ocean test |