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$Header: /u/gcmpack/MITgcm/doc/tag-index,v 1.80 2002/08/07 16:55:52 mlosch Exp $ |
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|
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Notes on tags used in MITgcmUV |
4 |
============================== |
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|
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checkpoint46c_post |
7 |
o Changes necessary for ocean in p-coordinates |
8 |
- Added new buoyancy relation = 'OCEANICP' |
9 |
- Added new parameters = gravitySign (this used to be contained inside |
10 |
the factor dRdZ which I added when we first switched to R coordinates). |
11 |
X GM/Redi is not compatible (yet) |
12 |
X bottom drag and no-slip need to be debugged. |
13 |
checkpoint46c_pre |
14 |
|
15 |
checkpoint46b_post |
16 |
o Added new equation of state -> JMD95Z and JMD95P |
17 |
- EOS of Jackett and McDougall, 1995, JPO |
18 |
- moved all EOS parameters into EOS.h |
19 |
- new routines ini_eos.F, store_pressure.F |
20 |
o Added UNESCO EOS, but not recommended because it requires |
21 |
in-situ temperature (see JMD95) |
22 |
o Modified formatting for knudsen2.f in utils/knudsen2 and added |
23 |
unesco.f to be used with POLY3 |
24 |
checkpoint46b_pre |
25 |
|
26 |
checkpoint46a_post |
27 |
o Added (atmospheric) pressure loading |
28 |
- new field in FFIELDS.h, etc... |
29 |
- new cpp flag ATMOSPHERIC_LOADING |
30 |
o Changed hFacC to _hFacC in calc_phi_hyd.F |
31 |
o Added SHORTWAVE_HEATING to some files for consistency |
32 |
checkpoint46a_pre |
33 |
|
34 |
checkpoint46 |
35 |
further merges from release1_p5 |
36 |
o new ctrl package |
37 |
- adopted from ECCO environment to enable optimization |
38 |
- added Eliassen Palm fluxes to controls |
39 |
o added Eliassen Palm flux controls to gradient check package |
40 |
o cost package |
41 |
- Compatible with new ctrl package |
42 |
- added Eliassen Palm cost hooks |
43 |
- modif's of existing cost functions |
44 |
o Adjoint-related bug fixes in kpp: |
45 |
- kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix |
46 |
- kpp_routines: store of Rib avoids partial recomputation bug of TAF. |
47 |
o autodiff package |
48 |
- flow directives: |
49 |
+ new for S/R do_the_model_io |
50 |
+ enhanced for S/R checkpoint |
51 |
+ new gmredi.flow |
52 |
- Introduced CPP option ALLOW_AUTODIFF_MONITOR to |
53 |
disable adcommon.h/g_common.h by default. |
54 |
- fixed problem for adjoint of global_max |
55 |
o modified verification/carbon/ |
56 |
o New setup for adjoint of global_ocean |
57 |
o added hooks for Eliassen Palm fluxes (dynamics.F, ini_fields.F) |
58 |
o cleaned TAF keys iikey, idkey (dynamics.F, thermodynamics.F) |
59 |
o incorporated hooks for sponge layer code (external_forcing.F) |
60 |
|
61 |
checkpoint45d_post |
62 |
o import 2 fixes from release1_p5 (CG2D.h & packages_readparms.F) |
63 |
o use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S |
64 |
(affects plume_on_slope "cg2d" output) |
65 |
o add new parameter deltaTfreesurf for free-surface time stepping |
66 |
o exchange gT,gS when using staggerTimeStep & GM & Oly<4 |
67 |
o NONLIN_FRSURF: rescale gNm1 to get a better conservation with A-B |
68 |
o change phiMin in exp1 (to agree with documentation) |
69 |
o add new flags: |
70 |
- T,S forcing inside/outside Adams-Bashforth |
71 |
- turn off temp,salt advection and/or forcing |
72 |
- for each tracer, define internal flag for multiDimAdvection & A-B |
73 |
o monitor: change definition of KE to check conservation of Energy |
74 |
|
75 |
checkpoint45c_post |
76 |
o Removed f90 comments ("!") |
77 |
o Modified initialisations to enable exf package for MITgcm |
78 |
(without invoking ECCO_PACKAGE). |
79 |
o modifications to gradient check package (Martin Losch) |
80 |
- enable centered differences |
81 |
- modified format of standard output |
82 |
|
83 |
checkpoint45b_post |
84 |
o cleaned exchange calls in cg2d |
85 |
o Included CPP option ALLOW_AUTODIFF_MONITOR in forward_step |
86 |
o included CPP option SINGLE_LAYER_MODE in thermodynamics |
87 |
to configure barotropic setup (Martin Losch) |
88 |
o moved some initialisations within bi,bj loop in dynamics |
89 |
(TAF flow dependency) |
90 |
o in initialise_varia, moved call packages_init_variables |
91 |
before convective_adjustment_init |
92 |
(corresponding adjustment of TAF tape initialisation). |
93 |
o in calc_diffusivity/calc_viscosity extended domain to full overlap. |
94 |
|
95 |
checkpoint45a_post |
96 |
o compute Rho over the whole domain (extend iMin,jMin indices) |
97 |
o specific exchange for X-slice domain (case Ny=1) |
98 |
o argument futureIter of S/R obcs_calc missing in exp4 & internal_wave /code |
99 |
o solve_for_pressure : set cg2d_x to zero where OBCS are applied |
100 |
|
101 |
checkpoint44h_post = checkpoint45 |
102 |
o Fix to restore differentiability: |
103 |
place at which packages_init_variables is called in |
104 |
initialise_varia is crucial for reverse control flow. |
105 |
o modifications in GMRedi to enable stable adjoint |
106 |
(corresponding modif's in thermodynamics, dynamics) |
107 |
o added missing hook for sponge layer code in external_forcing |
108 |
o modified test cost functions |
109 |
o storing in gad_advection (plus removal of write(0,*)! |
110 |
o missing headers TR1.h added in convective_adjustment routines |
111 |
o errorMessageUnit set non-equal zero in eeboot |
112 |
(conflict on some platforms, e.g. IBM SP3) |
113 |
o modified carbon verif. |
114 |
|
115 |
checkpoint44h_pre |
116 |
o vertical grid option: allow to put the Interface at the middle between |
117 |
2 cell-centers ; replace delZ in pkg/kpp by drF. |
118 |
o GM Advective form: Tracers are advected using the residual transport (= |
119 |
Euler+GM-bolus); set param GM_AdvSeparate=T to return to previous form. |
120 |
|
121 |
checkpoint44g_post |
122 |
o fix surface correction term in multiDimAdvection (affects plume_on_slope |
123 |
results) ; ifdef missing in thermodynamics.F |
124 |
|
125 |
checkpoint44f_pre,checkpoint44f_post |
126 |
o added PTRACERS package |
127 |
This allows an arbitrary number of passive tracers to be integrated |
128 |
forward simultaneously with the dynamicaly model. |
129 |
+ Implemented so far: |
130 |
- basic forward algorithm (time-stepping, advection, diffusion, convection) |
131 |
- I/O and checkpointing |
132 |
- GM/Redi *but* using the GM/Redi coefficient of Salt |
133 |
+ Not implemented so far: |
134 |
- KPP |
135 |
- OBCS |
136 |
+ No specific example supplied (yet) but global_ocean.90x40x15 has the |
137 |
necessary data.ptracer file. Simply use -enable=ptracers and uncomment |
138 |
line in data.pkg. |
139 |
+ This package is disabled by default since it increases storage. |
140 |
|
141 |
|
142 |
o testscript: added -cleanup option |
143 |
o Shap_filt: a) new shap_filt S/R to use no-slip BC with S2 filter |
144 |
b) enable to filter 2D fields. |
145 |
|
146 |
checkpoint44e_pre,post |
147 |
o re-wrote convective adjustment to use pre-calculated weights |
148 |
Affects: model/src/convective_adjustment.F, convective_adjustment_ini.F |
149 |
Adds: model/src/convective_weights.F, convectively_mixtracer.F |
150 |
Original calls to convect() still in place. |
151 |
|
152 |
chkpt44d_pre,post |
153 |
o added missing EXCLUDE_MONITOR flags |
154 |
o changed "e" to "_d" in gmredi_slope_limit, gmredi_slope_psi |
155 |
(incompatible typ in MIN/MAX expressions caused problems |
156 |
on IBM SP3) |
157 |
o in genmake added variable MAKEDEPEND |
158 |
plus resetting for case SunOS |
159 |
o added timer_stats.c routine for IBM SP3 |
160 |
o removed variables in dynamics |
161 |
!!! I forgot to create tag chkpt44d_pre !!! |
162 |
!!! But chkpt44d_pre = chkpt44c_post !!! |
163 |
|
164 |
o real fresh water flux implemented with non-linear free-surface. |
165 |
|
166 |
chkpt44c_pre,post |
167 |
o few fix (mask in shap_s2, EmPmR in external_field_load, |
168 |
USE_NATURAL_BCS in solve_for_P); |
169 |
o add arguments myIter & myTime to S/R obcs_calc & solve_for_P |
170 |
|
171 |
checkpoint44b_pre/_post |
172 |
o merge of relevant stuff from the ecco-branch: |
173 |
- genmake: removed $S64 overwrite for case SunOS |
174 |
- pkg/exf: update and corrections for field swapping and obcs |
175 |
- pkg/ecco: parameter lists for the_model_main, the_main_loop |
176 |
harmonized between ECCO and MITgcm |
177 |
- pkg/autodiff: added flow directives for obcs, mdsio_gl_slice |
178 |
updated checkpointing_lev... lists for obcs |
179 |
- model/src: minor changes in forward_step, plot_field |
180 |
added directive for divided adjoint in the_main_loop |
181 |
- pkg/mdsio: added mdsio_gl_slice |
182 |
|
183 |
o check parameters & config (chkpt44a_pre,post) |
184 |
o OBC and NonLin_FrSurf. |
185 |
|
186 |
checkpoint44 |
187 |
o fix bug in mom_vi_del2uv |
188 |
o select when filters are applied ; add options to zonal_filter (data.zonfilt) |
189 |
o gmredi: fix Pb in the adiabatic form ; add options (.e.g. Bolus advection) |
190 |
o update AIM experiments (NCEP input files) |
191 |
o improve and extend diagnostics (Monitor, TimeAve with NonLin-FrSurf) |
192 |
o added some stuff for AD |
193 |
|
194 |
checkpoint43 |
195 |
o added two new advection tests |
196 |
o added global 4x4 degree ocean test |
197 |
o added test of H&S94 with free surface on cube |
198 |
o some final mods for gradient check, adjoint,... |
199 |
|
200 |
checkpoint42 |
201 |
Fixed AD-related problems: |
202 |
o Store directives up-to-date with re-arranged Adams-Bashforth |
203 |
(mainly thermodynamics.F) |
204 |
o New store directives for multi-dim. advection schemes |
205 |
* new CPP flag ALLOW_MULTI_DIM_ADVECTION |
206 |
* new common block and key passkey |
207 |
(mainly gad_advection.F) |
208 |
o Modified store directives for split of dynamics/thermodynamics |
209 |
for the case ALLOW_KPP |
210 |
o Cleaned argument list for timestep_tracer.F |
211 |
|
212 |
checkpoint41 |
213 |
o re-formatted/added comments in prologues of key subroutines |
214 |
to work with protex |
215 |
|
216 |
checkpoint40 |
217 |
o moved calc_gs, calc_gt and calc_tr1 back to model/src |
218 |
o added FLT (floats) package from Arne along with demo. experiment |
219 |
o re-arranged Adams-Bashforth scheme for tracers to allow easier |
220 |
implementation of forward-in-time forcing terms |
221 |
o more mods for non-linear free-surface including new variable |
222 |
o modified multi-dim method to work on cube |
223 |
o bug fix in KPP (from DM) |
224 |
|
225 |
checkpoint40pre9 |
226 |
o added DST advection schemes |
227 |
o fix MPI bug on SGI's |
228 |
o modifications for non-linear free-surface |
229 |
o fixed conditionals for fixed flow/passive tracer only mode |
230 |
o added tension/strain form of stress tensor |
231 |
o changes to commenting of arguments for TAF/TAMC |
232 |
o added/updated many matlab scripts |
233 |
o added multi-dimensional advection method for tracers |
234 |
|
235 |
checkpoint40pre8 |
236 |
o new package rw/ |
237 |
Added method for dumping intermediate local arrays: |
238 |
mdsio_writetile - same as mdsio_writefield except works from inside |
239 |
bi,bj loop |
240 |
mdsio_writelocal - same as mdsio_writetile except works for local |
241 |
arrays |
242 |
write_local_r? - higher-level wrapper for mdsio_writelocal |
243 |
Controlled by diagFreq. Defaults to zero (ie. no dumps) |
244 |
Example given at end of mom_vecinv.F that dumps some local arrays. |
245 |
o replaced calc_mom_rhs.F by mom_fluxform.F/mom_vecinc.F to |
246 |
control flux-form versus vector invariant code. |
247 |
Switch is runtime flag vectorInvariantMomentum (defaults to false) |
248 |
or genmake -DISABLE ... |
249 |
o TAMC-related update to cope with mom_fluxform.F/mom_vecinc.F |
250 |
(additional storing is now needed for case vecinv; |
251 |
currently nothing implemented to switch this storing off |
252 |
in case fluxform is used since no CPP flag available). |
253 |
|
254 |
checkpoint40pre7 |
255 |
o bug fix in dynamics.F |
256 |
calc_viscosity called before k=1,Nr loop. |
257 |
o added some #ifdef's ALLOW_PASSIVE_TRACER |
258 |
o cleaned initialisations in ctrl_map_ini |
259 |
related to TAF |
260 |
|
261 |
checkpoint40pre6 |
262 |
o split dynamics into thermodynamics & dynamics |
263 |
o corresponding split of calc_diffusivity into |
264 |
calc_diffusivity, calc_viscosity |
265 |
(kpp_calc_diff, kpp_calc_visc). |
266 |
o Added diffkr, kapgm to control variables |
267 |
o bug fix in gmredi_slope_limit for ldd97 |
268 |
|
269 |
checkpoint40pre5 |
270 |
o proper initialization of Adams-Bashforth time stepping |
271 |
+ uses forward step for very first step of model (iter=0) |
272 |
o re-generated *all* output since almost all output is modified by this |
273 |
change (sorry but we've been putting this one off for about 2 years) |
274 |
+ natl_box, aim.5l_Equatorial_Channel and aim.5l_zon-ave were |
275 |
*not* regenerated since they are already out of date and I don't |
276 |
want to create the impression that they are suddenly working. |
277 |
o removed KAP stuff for DEC's |
278 |
o modified/added many .cvsignore files in */code and */input |
279 |
o added new expt "solid-body.cs-32x32x1" |
280 |
+ this uses an alternative form of ini_curvilinear_grid.F which |
281 |
is not necessarily any better than the current one... |
282 |
|
283 |
checkpoint40pre4 |
284 |
o added re-initialisations of utrans,vtrans,rtrans in |
285 |
calc_common_factors which are crucial for TAF. |
286 |
o extended iMin,jMin range for calc_common_factors, |
287 |
calc_diffusivity |
288 |
o added option ALLOW_PASSIVE_TRACER |
289 |
o a few minor updates and fixes |
290 |
|
291 |
checkpoint40pre3 |
292 |
o created calc_gtr1.F for gad package |
293 |
o split the_main_loop and re-introduced forward_step |
294 |
o some recomputations of nIter0 for TAMC |
295 |
|
296 |
checkpoint40pre2 |
297 |
o Updated to latest branch of AJA, JMC |
298 |
o Added gradient check package |
299 |
o Added routines for passive tracer handling |
300 |
o Added carbon sequestration sensitivity experiment |
301 |
|
302 |
checkpoint39 |
303 |
o Modifications and fixes to support TAMC |
304 |
(mainly missing or wrong directives) |
305 |
o Corrected common blocks when fooling TAMC to produce adjoint I/O |
306 |
in addummy_in_stepping |
307 |
o Updated verification/vero/ (bug fixes in code/, correct pickups in input/) |
308 |
o Enabled "sliced" (xz-,yz-) exchanges, needed for obcs. |
309 |
o Included following packages: |
310 |
cal: calendar |
311 |
exf: external forcing |
312 |
ecco: essential routines to control use of cal, exf |
313 |
(NB: this is not the full ECCO environment) |
314 |
o disabled some packages by default in genmake |
315 |
|
316 |
checkpoint38 |
317 |
o see notes_c37_adj.txt |
318 |
o corrected wrong layer index in external_forcing_t |
319 |
o replaced the_main_loop/forward_step by the_main_loop |
320 |
o removed forceoutput from write_state |
321 |
(replaced criteria for initial/final state) |
322 |
o added runtime flag for pre-C35 pickups: usePickupBeforeC35 |
323 |
|
324 |
checkpoint37 |
325 |
o mdsio.F routine split and packaged in pkg/mdsio |
326 |
(mdsio.F and mdsio_gl.F still exist in eesupp/src but are not |
327 |
used unless genmake -disable=mdsio) |
328 |
o allow a more precise surface-geopotential gradient for the atmosphere |
329 |
taking into account the change in space of Alpha (=1/rho) at the surface. |
330 |
o variable "etaN" (replace cg2d_x) is the surface R-anomaly [r unit] |
331 |
(ocean: sea surface height [m] / atmos: surface pressure anomaly [Pa]) |
332 |
o Change units: Phi_Hydrostatic (=phiHyd), Phi_Surface(=cg2d_x) and |
333 |
Phi_NonHydrostatic (=cg3d_x), all have now the dimension of a potential |
334 |
[m2/s2] (pressure/rhoConst in the ocean ; Geo-Potential in the atmosphere). |
335 |
o Time-Average diagnostics defined as a pseudo package "timeave". |
336 |
o pickup files : old pickup (before c35) did not work with new code (c35 |
337 |
and after) unless activating 2 commented lines in initialise-varia. |
338 |
o Non-Hydrostatic pickup file Pb fixed. |
339 |
o bug with Rigid-lid version (since c35) fixed. |
340 |
|
341 |
checkpoint36 |
342 |
o implement Crank-Nickelson barotropic time-stepping |
343 |
o recover Time-Average diagnostics |
344 |
o fix Pb in checkpoint (PR#19) |
345 |
o AIM become a standard package ; clean unused CPP_kees |
346 |
|
347 |
checkpoint35 |
348 |
o subtantial rewrite of dynamics.f |
349 |
o allows staggered time-stepping |
350 |
o packaged obcs, aim (Atmospheric Physics), zonal_filt, shap_filt |
351 |
o added bottom drag (linear + quadratic) |
352 |
|
353 |
checkpoint34 |
354 |
o Modified exchange routines for correct reverse simulation. |
355 |
o Added verification output to comply with bug fix in impldiff.F |
356 |
as of c33 (exp2, natl_box). |
357 |
o Corrected store directives in dynamics.F |
358 |
o Corrected array boundaries in impldiff.F |
359 |
o Corrected array dimensions in gmredi. |
360 |
Added temporary scalars to avoid storage by TAMC (gmredi, kpp). |
361 |
o Added routine GLOBAL_SUM_INT to global_sum.F |
362 |
o Added mdsio_gl.F for ECCO purposes. |
363 |
|
364 |
checkpoint33 |
365 |
o Fixed bug in lower BC in impldiff.F |
366 |
o Fixed confusion about units of forcing arrays in FFIELDS.h |
367 |
namely Fu,Fv,Qnet,Qsw,EmPmR: |
368 |
- Removed verification/natl_box/code/external_fields_scale.F |
369 |
(did not differ from that in model/src) |
370 |
- Changed units of fu,fv,Qnet,Qsw,EmPmR back to proper units |
371 |
(see FFIELDS.h for description) |
372 |
- Scale fu,fv,Qnet,Qsw,EmPmR when used in external_forcing_surf.F, |
373 |
kpp_calc.F and kpp_transport_t.F |
374 |
- Removed model/src/external_fields_scale.F and calls to it |
375 |
- verification/natl_box uses flux data with "atmospheric" sign so |
376 |
a special version of external_fields_load.F is used to |
377 |
change the data as it's read in. This way, the arrays |
378 |
have the right units and signs at all times tha a user could |
379 |
possibly use them. |
380 |
o Corrected genmake to delete a temporary file during configuration |
381 |
|
382 |
checkpoint32 |
383 |
o Scaling of forcing fields moved from external_forcing.F to |
384 |
external_fields_scale.F, called directly after loading fields. |
385 |
o Surface relaxation terms added to surface tendency fields in |
386 |
extra subroutine. |
387 |
o impldiff.F changed to avoid storing by TAMC of huge intermediate |
388 |
fields. |
389 |
o Changes in GMRedi to comply with packaging structure. |
390 |
o Modifications and bug fixes in KPP package. |
391 |
o Verification experiment for KPP added (verification/nat_box/) |
392 |
|
393 |
checkpoint31 |
394 |
o Packages interface brought in line with defined standard |
395 |
-> new routines packages_...F |
396 |
-> changes in initialise_fixed.F, initialise_varia.F |
397 |
-> enables initialisation interface for ECCO package |
398 |
o Rescaling of external forcing fields immediately after read |
399 |
(removed from external_forcing.F) |
400 |
-> new: surface_fields_scale.F |
401 |
-> affects ini_foorcing.F, external_fields_load.F |
402 |
o Computation of surface tendencies before tendency updates. |
403 |
-> new: external_forcing_surf.F |
404 |
o Change of variable names useGMRedi, useKPP, useECCO |
405 |
o Further changes in dynamics.F, impldiff.F for TAMC |
406 |
o Tested for experiments 0, 2, 4. |
407 |
- not yet tested for GMRedi. |
408 |
- not yet tested for KPP. |
409 |
|
410 |
checkpoint30 |
411 |
o Updates for OBCs |
412 |
o New experiment for test OBCs (internal_wave) |
413 |
o New output.txt in verification/exp4/results/ |
414 |
o Updates for KPP: calculation of viscosity corrected, new variables |
415 |
kpp_dumpFreq and kpp_taveFreq |
416 |
o CPP'd calls to system routines for TARGET_CRAY_VECTOR (P.H.) |
417 |
and entry for T90 in genmake |
418 |
|
419 |
checkpoint29 |
420 |
o packaged KPP and GM/Redi |
421 |
|
422 |
checkpoint28 |
423 |
o Corrected initialization of hFacMin for difference vertical coordinates |
424 |
o Modified calculation of partial cell thickness to more robust algorithm |
425 |
o config_summary.F: replaced write_1D_... by write_0D_... |
426 |
read_write.F: added subroutines write_0D_... |
427 |
o routines calc_common_factors, calc_gs, calc_gt, calc_phi_hyd, find_rho: |
428 |
included some initialisations required for TAMC. |
429 |
o routine calc_isoslopes: modified sqrt computation to make it |
430 |
differentiable for zero argument. |
431 |
o routines dynamics, impldiff: |
432 |
included store directives and tape key computations required for TAMC. |
433 |
o ALL TAMC related changes are between ifdef ALLOW_AUTODIFF_TAMC |
434 |
|
435 |
checkpoint27 |
436 |
o fixed calc_isoslopes() to so that cancellation of terms in tensor |
437 |
formulation works properly with variable resolution. |
438 |
o restructured the calling tree between the_model_main() and dynamics() |
439 |
o split initialise() into initialise_fixed() and initialise_varia() |
440 |
o introduced initialization file pSurfInitFile for free surface (cg2d_x) |
441 |
in new routine ini_psurf() |
442 |
|
443 |
checkpoint26 |
444 |
o moved some #ifdef in optional routines to encompass everything |
445 |
except the argument declarations. This was using up some memory. |
446 |
o fixed macros like _ADT to work with both versions of Linux cpp |
447 |
o cleaned up some unused and uninitialized variables |
448 |
(helps when debugging with strict compile options) |
449 |
o split up CPP_EEOPTIONS.h into options and macros |
450 |
(macros are now in eesupp/inc/CPP_EEMACROS.h) |
451 |
o patch for 2 processor JAM mode |
452 |
|
453 |
checkpoint25 |
454 |
o updates for OBCs and NH |
455 |
o dramatically reduced memory usage |
456 |
o added "JAM" routines for use on Artic network |
457 |
o parameterization of convection by implicit vertical diffusion |
458 |
o added a diagnostic of convective index |
459 |
o moved call to calc_divg_hat() from dynamics() to solve_for_pressure() |
460 |
(this is was partly for OBCs and NH but also in anticipation of |
461 |
an explicit free-surface option) |
462 |
o initial state input files for U and V |
463 |
|
464 |
checkpoint24 |
465 |
o Removed some spurious "REAL"s |
466 |
o Updated KPP to latest version from JPL |
467 |
o Added a COS(latitude) in horizontal viscosity |
468 |
|
469 |
checkpoint23 |
470 |
o Added del^4 diffusion for salt and temperature |
471 |
o Multiple minor fixes (implicit none's, arguments to global_sum, etc.) |
472 |
|
473 |
checkpoint22 |
474 |
o Made many small changes: implicit none, format(i5), etc... |
475 |
o Introduced KPP mixing scheme (compiles and runs but *not* tested) |
476 |
|
477 |
checkpoint21 |
478 |
o Introduced new I/O package that supports direct-access records (mdsio.F) |
479 |
o Split-up mid-level I/O routines |
480 |
o Updated input data for experiments 0,1,2,4 and 5 |
481 |
o Finally removed the genmake.* scripts (everyone seems happy with genmake) |
482 |
|
483 |
checkpoint20 |
484 |
o Tidied up open-boundaries some more |
485 |
o Added non-hydrostatic code |
486 |
o Fixed some input data |
487 |
o Modified MPI start-up to work in "coupled" context. |
488 |
|
489 |
checkpoint19 |
490 |
o Tidied up directory structure for verification experiments. |
491 |
o Added new code for open boundaries. |
492 |
o Corrected advective terms near boundaries. |
493 |
o Added CPP flag for "old UV" geometry and corrected spherical geometry. |
494 |
o Implemented free-slip/no-slip BCs and del^4 dissipation. |
495 |
o Split default parameters out of ini_parms.F into set_defaults.F. |
496 |
|
497 |
checkpoint18 |
498 |
o Further changes for optional code generation with |
499 |
CPP - ugh! |
500 |
|
501 |
checkpoint17 |
502 |
o Beginning to incorporating modularity |
503 |
for supporting atmos. and ocean configs. |
504 |
o Small changes for TAMC complinace |
505 |
o New ultra simple test case. Barotropic box |
506 |
configuration "exp0". |
507 |
|
508 |
checkpoint16 |
509 |
o Minor changes to exchange routines to support |
510 |
accumulation in reverse mode. Adjoint of an |
511 |
assignment is an addition. |
512 |
o Changes to support compilation by TAMC (LR(1) |
513 |
syntax) and by g77 under Linux ( 72 character |
514 |
limit ). |
515 |
|
516 |
checkpoint15 |
517 |
Rewrote exchange routines to allow |
518 |
o General tile <-> tile connectivity. |
519 |
o TAMC reverse mode flag ( is this really needed? ) |
520 |
o Variable width overlap and exchange region widths. |
521 |
o Hooks for sharing data via DMA, Arctic, Memory Channel, |
522 |
shmput/shmget, VIA, SYSV shmem and every other cool |
523 |
communication method. |
524 |
|
525 |
checkpoint14 |
526 |
Consistent isomorphism chages made. These allow dynamical core |
527 |
to support both pressure and meters as a vertical coordinate. |
528 |
|
529 |
checkpoint13 |
530 |
Release which corrects global_max problem and a couple |
531 |
of KGM time-averaging diagnostic errors. Also contains |
532 |
a double-gyre experiment setup as well as the baseline |
533 |
4 degree global template. The double gyre template is |
534 |
organised to allow it to be applied automatically to |
535 |
the baseline configuration. |
536 |
|
537 |
branch-point-rdot |
538 |
A few tidy-ups have been made bt the real point of this |
539 |
check-point (excuse the pun) is to allow a branch to be |
540 |
made for the purposes of adding the rDot alterations. |
541 |
I don't want to commit the rDot to the main-trunk until |
542 |
we've actually tested it... |
543 |
|
544 |
checkpoint12 |
545 |
Tidy up and added generic genmake script (formerly |
546 |
configure script). |
547 |
Released to testers. |
548 |
|
549 |
checkpoint11 |
550 |
Re-arranged initialise() and introduced ini_vertical_grid() |
551 |
and ini_masks_etc(). |
552 |
|
553 |
checkpoint10 |
554 |
Introduced the configure script. |
555 |
Separated out the diags package. |
556 |
Added template for writing time-averages of tile/intermediate quantities. |
557 |
Updated SIZE.h in exp2 and made the data big-endian. |
558 |
|
559 |
checkpoint9 |
560 |
MPI fix. Filename changes (meta/data). salbin*y stuff. |
561 |
General tidy-up. |
562 |
SST.bin SSS.bin added to verification/exp2 |
563 |
|
564 |
checkpoint8 |
565 |
Inludes time-dependant forcing and time-averaging. |
566 |
Works at 4x4 and 2.8125x2.8125 global |
567 |
|
568 |
checkpoint7-4degree-ref |
569 |
Branch from checkpoint7. Released for application to |
570 |
global modeling and general modeling - process studies, regional |
571 |
model etc.. |
572 |
Configured for verification/exp2 - 4 degree global, two process. |
573 |
|
574 |
checkpoint7 |
575 |
Created by cnh |
576 |
Simple 4 degree global simulation |
577 |
configuration. |
578 |
Includes climatological wind, |
579 |
hydrography, bathymetry etc |
580 |
Does not include Heat Flux and E-P |
581 |
|
582 |
checkpoint6 |
583 |
Created by cnh |
584 |
merged checkpoint5 with CD and |
585 |
spherical polar code. |
586 |
Still some problems with GM Redi |
587 |
abd full topography. |
588 |
|
589 |
checkpoint5 |
590 |
Created by AJA |
591 |
contains updates to GM Redi |
592 |
and reordered timestepping loop |
593 |
for Implicit Diffusion. |
594 |
|
595 |
checkpoint4 |
596 |
Created by cnh |
597 |
Contains memory saving macros ( _rdxc etc..) for when |
598 |
grid variations are limited. |
599 |
Contains polynomial coeffs for EOS and knudsen program |
600 |
for generation. |
601 |
|
602 |
checkpoint3 |
603 |
Created by cnh |
604 |
Added extra flags for runtime options |
605 |
Added this file |
606 |
Added implicit free-surface |
607 |
Added pre-conditioner |
608 |
Put compare01 into repository ( compare01/... ) |
609 |
Put data and eedata into repository ( verification/exp1 ) |
610 |
|
611 |
checkpoint2 |
612 |
Created by AJA |
613 |
Added GM/Redi |
614 |
|
615 |
checkpoint1 |
616 |
Created by AJA |
617 |
Restructured kloop in dynamics.F |
618 |
Added non-linear EOS |
619 |
|
620 |
baseline |
621 |
Original checked in code |