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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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checkpoint36 |
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o implement Crank-Nirotropic time-stepping |
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o recover Time-Average diagnostics |
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o fix Pb in checkpoint (PR#19) |
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o AIM become a standard package ; clean unused CPP_kees |
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checkpoint35 |
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o subtantial rewrite of dynamics.f |
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o allows staggered time-stepping |
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o packaged obcs, aim (Atmospheric Physics), zonal_filt, shap_filt |
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o added bottom drag (linear + quadratic) |
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checkpoint34 |
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o Modified exchange routines for correct reverse simulation. |
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o Added verification output to comply with bug fix in impldiff.F |
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as of c33 (exp2, natl_box). |
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o Corrected store directives in dynamics.F |
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o Corrected array boundaries in impldiff.F |
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o Corrected array dimensions in gmredi. |
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Added temporary scalars to avoid storage by TAMC (gmredi, kpp). |
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o Added routine GLOBAL_SUM_INT to global_sum.F |
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o Added mdsio_gl.F for ECCO purposes. |
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checkpoint33 |
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o Fixed bug in lower BC in impldiff.F |
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o Fixed confusion about units of forcing arrays in FFIELDS.h |
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namely Fu,Fv,Qnet,Qsw,EmPmR: |
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- Removed verification/natl_box/code/external_fields_scale.F |
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(did not differ from that in model/src) |
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- Changed units of fu,fv,Qnet,Qsw,EmPmR back to proper units |
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(see FFIELDS.h for description) |
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- Scale fu,fv,Qnet,Qsw,EmPmR when used in external_forcing_surf.F, |
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kpp_calc.F and kpp_transport_t.F |
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- Removed model/src/external_fields_scale.F and calls to it |
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- verification/natl_box uses flux data with "atmospheric" sign so |
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a special version of external_fields_load.F is used to |
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change the data as it's read in. This way, the arrays |
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have the right units and signs at all times tha a user could |
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possibly use them. |
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o Corrected genmake to delete a temporary file during configuration |
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checkpoint32 |
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o Scaling of forcing fields moved from external_forcing.F to |
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external_fields_scale.F, called directly after loading fields. |
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o Surface relaxation terms added to surface tendency fields in |
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extra subroutine. |
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o impldiff.F changed to avoid storing by TAMC of huge intermediate |
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fields. |
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o Changes in GMRedi to comply with packaging structure. |
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o Modifications and bug fixes in KPP package. |
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o Verification experiment for KPP added (verification/nat_box/) |
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checkpoint31 |
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o Packages interface brought in line with defined standard |
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-> new routines packages_...F |
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-> changes in initialise_fixed.F, initialise_varia.F |
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-> enables initialisation interface for ECCO package |
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o Rescaling of external forcing fields immediately after read |
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(removed from external_forcing.F) |
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-> new: surface_fields_scale.F |
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-> affects ini_foorcing.F, external_fields_load.F |
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o Computation of surface tendencies before tendency updates. |
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-> new: external_forcing_surf.F |
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o Change of variable names useGMRedi, useKPP, useECCO |
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o Further changes in dynamics.F, impldiff.F for TAMC |
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o Tested for experiments 0, 2, 4. |
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- not yet tested for GMRedi. |
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- not yet tested for KPP. |
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checkpoint30 |
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o Updates for OBCs |
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o New experiment for test OBCs (internal_wave) |
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o New output.txt in verification/exp4/results/ |
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o Updates for KPP: calculation of viscosity corrected, new variables |
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kpp_dumpFreq and kpp_taveFreq |
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o CPP'd calls to system routines for TARGET_CRAY_VECTOR (P.H.) |
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and entry for T90 in genmake |
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checkpoint29 |
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o packaged KPP and GM/Redi |
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checkpoint28 |
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o Corrected initialization of hFacMin for difference vertical coordinates |
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o Modified calculation of partial cell thickness to more robust algorithm |
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o config_summary.F: replaced write_1D_... by write_0D_... |
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read_write.F: added subroutines write_0D_... |
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o routines calc_common_factors, calc_gs, calc_gt, calc_phi_hyd, find_rho: |
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included some initialisations required for TAMC. |
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o routine calc_isoslopes: modified sqrt computation to make it |
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differentiable for zero argument. |
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o routines dynamics, impldiff: |
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included store directives and tape key computations required for TAMC. |
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o ALL TAMC related changes are between ifdef ALLOW_AUTODIFF_TAMC |
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checkpoint27 |
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o fixed calc_isoslopes() to so that cancellation of terms in tensor |
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formulation works properly with variable resolution. |
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o restructured the calling tree between the_model_main() and dynamics() |
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o split initialise() into initialise_fixed() and initialise_varia() |
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o introduced initialization file pSurfInitFile for free surface (cg2d_x) |
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in new routine ini_psurf() |
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checkpoint26 |
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o moved some #ifdef in optional routines to encompass everything |
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except the argument declarations. This was using up some memory. |
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o fixed macros like _ADT to work with both versions of Linux cpp |
| 112 |
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o cleaned up some unused and uninitialized variables |
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(helps when debugging with strict compile options) |
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o split up CPP_EEOPTIONS.h into options and macros |
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(macros are now in eesupp/inc/CPP_EEMACROS.h) |
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o patch for 2 processor JAM mode |
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checkpoint25 |
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o updates for OBCs and NH |
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o dramatically reduced memory usage |
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o added "JAM" routines for use on Artic network |
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o parameterization of convection by implicit vertical diffusion |
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o added a diagnostic of convective index |
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o moved call to calc_divg_hat() from dynamics() to solve_for_pressure() |
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(this is was partly for OBCs and NH but also in anticipation of |
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an explicit free-surface option) |
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o initial state input files for U and V |
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checkpoint24 |
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o Removed some spurious "REAL"s |
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o Updated KPP to latest version from JPL |
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o Added a COS(latitude) in horizontal viscosity |
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checkpoint23 |
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o Added del^4 diffusion for salt and temperature |
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o Multiple minor fixes (implicit none's, arguments to global_sum, etc.) |
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| 138 |
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checkpoint22 |
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o Made many small changes: implicit none, format(i5), etc... |
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o Introduced KPP mixing scheme (compiles and runs but *not* tested) |
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checkpoint21 |
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o Introduced new I/O package that supports direct-access records (mdsio.F) |
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o Split-up mid-level I/O routines |
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o Updated input data for experiments 0,1,2,4 and 5 |
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o Finally removed the genmake.* scripts (everyone seems happy with genmake) |
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checkpoint20 |
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o Tidied up open-boundaries some more |
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o Added non-hydrostatic code |
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o Fixed some input data |
| 152 |
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o Modified MPI start-up to work in "coupled" context. |
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checkpoint19 |
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o Tidied up directory structure for verification experiments. |
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o Added new code for open boundaries. |
| 157 |
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o Corrected advective terms near boundaries. |
| 158 |
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o Added CPP flag for "old UV" geometry and corrected spherical geometry. |
| 159 |
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o Implemented free-slip/no-slip BCs and del^4 dissipation. |
| 160 |
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o Split default parameters out of ini_parms.F into set_defaults.F. |
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checkpoint18 |
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o Further changes for optional code generation with |
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CPP - ugh! |
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checkpoint17 |
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o Beginning to incorporating modularity |
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for supporting atmos. and ocean configs. |
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o Small changes for TAMC complinace |
| 170 |
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o New ultra simple test case. Barotropic box |
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configuration "exp0". |
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checkpoint16 |
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o Minor changes to exchange routines to support |
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accumulation in reverse mode. Adjoint of an |
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assignment is an addition. |
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o Changes to support compilation by TAMC (LR(1) |
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syntax) and by g77 under Linux ( 72 character |
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limit ). |
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checkpoint15 |
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Rewrote exchange routines to allow |
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o General tile <-> tile connectivity. |
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o TAMC reverse mode flag ( is this really needed? ) |
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o Variable width overlap and exchange region widths. |
| 186 |
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o Hooks for sharing data via DMA, Arctic, Memory Channel, |
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shmput/shmget, VIA, SYSV shmem and every other cool |
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communication method. |
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checkpoint14 |
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Consistent isomorphism chages made. These allow dynamical core |
| 192 |
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to support both pressure and meters as a vertical coordinate. |
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checkpoint13 |
| 195 |
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Release which corrects global_max problem and a couple |
| 196 |
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of KGM time-averaging diagnostic errors. Also contains |
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a double-gyre experiment setup as well as the baseline |
| 198 |
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4 degree global template. The double gyre template is |
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organised to allow it to be applied automatically to |
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the baseline configuration. |
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branch-point-rdot |
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A few tidy-ups have been made bt the real point of this |
| 204 |
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check-point (excuse the pun) is to allow a branch to be |
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made for the purposes of adding the rDot alterations. |
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I don't want to commit the rDot to the main-trunk until |
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we've actually tested it... |
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checkpoint12 |
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Tidy up and added generic genmake script (formerly |
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configure script). |
| 212 |
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Released to testers. |
| 213 |
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checkpoint11 |
| 215 |
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Re-arranged initialise() and introduced ini_vertical_grid() |
| 216 |
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and ini_masks_etc(). |
| 217 |
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checkpoint10 |
| 219 |
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Introduced the configure script. |
| 220 |
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Separated out the diags package. |
| 221 |
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Added template for writing time-averages of tile/intermediate quantities. |
| 222 |
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Updated SIZE.h in exp2 and made the data big-endian. |
| 223 |
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checkpoint9 |
checkpoint9 |
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MPI fix. Filename changes (meta/data). salbin*y stuff. |
MPI fix. Filename changes (meta/data). salbin*y stuff. |
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General tidy-up. |
General tidy-up. |
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