2 |
|
|
3 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
4 |
============================== |
============================== |
5 |
|
|
6 |
|
checkpoint46g_post |
7 |
|
o Include a new diagnostic variable phiHydLow for the ocean model |
8 |
|
- in z-coordinates, it is the bottom pressure anomaly |
9 |
|
- in p-coordinates, it is the sea surface elevation |
10 |
|
- in both cases, these variable have global drift, reflecting the mass |
11 |
|
drift in z-coordinates and the volume drift in p-coordinates |
12 |
|
- included time averaging for phiHydLow, be aware of the drift! |
13 |
|
o depth-dependent computation of Bo_surf for pressure coordinates |
14 |
|
in the ocean (buoyancyRelation='OCEANICP') |
15 |
|
- requires a new routine (FIND_RHO_SCALAR) to compute density with only |
16 |
|
Theta, Salinity, and Pressure in the parameter list. This routine is |
17 |
|
presently contained in find_rho.F. This routine does not give the |
18 |
|
correct density for 'POLY3', which would be a z-dependent reference |
19 |
|
density. |
20 |
|
o cleaned up find_rho |
21 |
|
- removed obsolete 'eqn' from the parameter list. |
22 |
|
o added two new verification experiments: gop and goz |
23 |
|
(4x4 degree global ocean, 15 layers in pressure and height coordinates) |
24 |
|
checkpoint46g_pre |
25 |
|
|
26 |
|
checkpoint46f_post |
27 |
|
o Enable tangent linear (forward mode) gradient checks: |
28 |
|
- extended active file handling to g_... files |
29 |
|
- added TANGENT_SIMULATION to theSimulationMode |
30 |
|
- extended grdchk package accordingly |
31 |
|
o added tangent linear setup in verification/carbon/code_ftl |
32 |
|
o added adjoint setup in verification/front_relax/code_ad |
33 |
|
|
34 |
|
checkpoint46e_post |
35 |
|
o Added new equation of state -> MDJWF |
36 |
|
- EOS of McDougall et al., 2002, JAOT, submitted |
37 |
|
- caveat: the equation of state is only valid for a smaller (more |
38 |
|
realistic?) range of values than JMD95P/Z and UNESCO |
39 |
|
- added masks to the calculation of pressure in store_pressure |
40 |
|
- added more check values for density in check_eos (ini_eos.F), some of |
41 |
|
the old check values are out of the range of the MDJWF-eos, so don't |
42 |
|
expect perfect matches for those |
43 |
|
checkpoint46e_pre |
44 |
|
|
45 |
|
checkpoint46d_post |
46 |
|
o fixed store_pressure to work with both buoyancy relation = 'OCEANIC' and |
47 |
|
'OCEANICP', also initialised field pressure correctly in ini_eos in the |
48 |
|
case of pressure coordinates. eosType='JMD95Z' in |
49 |
|
combination with buoyancyRelation='OCEANICP' now causes an error. |
50 |
|
o Changed p = pressure(i,j,k,bi,bj) to p = pressure(i,j,kRef,bi,bj) |
51 |
|
in find_alpha/beta. |
52 |
|
checkpoint46d_pre |
53 |
|
|
54 |
|
o Changed p = pressure(i,j,k,bi,bj) to p = pressure(i,j,kRef,bi,bj) |
55 |
|
so that JMD95Z and JMD95P give approptiate static stability in find_rho. |
56 |
|
|
57 |
|
checkpoint46c_post |
58 |
|
o Changes necessary for ocean in p-coordinates |
59 |
|
- Added new buoyancy relation = 'OCEANICP' |
60 |
|
- Added new parameters = gravitySign (this used to be contained inside |
61 |
|
the factor dRdZ which I added when we first switched to R coordinates). |
62 |
|
X GM/Redi is not compatible (yet) |
63 |
|
X bottom drag and no-slip need to be debugged. |
64 |
|
checkpoint46c_pre |
65 |
|
|
66 |
|
checkpoint46b_post |
67 |
|
o Added new equation of state -> JMD95Z and JMD95P |
68 |
|
- EOS of Jackett and McDougall, 1995, JAOT |
69 |
|
- moved all EOS parameters into EOS.h |
70 |
|
- new routines ini_eos.F, store_pressure.F |
71 |
|
o Added UNESCO EOS, but not recommended because it requires |
72 |
|
in-situ temperature (see JMD95) |
73 |
|
o Modified formatting for knudsen2.f in utils/knudsen2 and added |
74 |
|
unesco.f to be used with POLY3 |
75 |
|
checkpoint46b_pre |
76 |
|
|
77 |
|
checkpoint46a_post |
78 |
|
o Added (atmospheric) pressure loading |
79 |
|
- new field in FFIELDS.h, etc... |
80 |
|
- new cpp flag ATMOSPHERIC_LOADING |
81 |
|
o Changed hFacC to _hFacC in calc_phi_hyd.F |
82 |
|
o Added SHORTWAVE_HEATING to some files for consistency |
83 |
|
checkpoint46a_pre |
84 |
|
|
85 |
|
checkpoint46 |
86 |
|
further merges from release1_p5 |
87 |
|
o new ctrl package |
88 |
|
- adopted from ECCO environment to enable optimization |
89 |
|
- added Eliassen Palm fluxes to controls |
90 |
|
o added Eliassen Palm flux controls to gradient check package |
91 |
|
o cost package |
92 |
|
- Compatible with new ctrl package |
93 |
|
- added Eliassen Palm cost hooks |
94 |
|
- modif's of existing cost functions |
95 |
|
o Adjoint-related bug fixes in kpp: |
96 |
|
- kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix |
97 |
|
- kpp_routines: store of Rib avoids partial recomputation bug of TAF. |
98 |
|
o autodiff package |
99 |
|
- flow directives: |
100 |
|
+ new for S/R do_the_model_io |
101 |
|
+ enhanced for S/R checkpoint |
102 |
|
+ new gmredi.flow |
103 |
|
- Introduced CPP option ALLOW_AUTODIFF_MONITOR to |
104 |
|
disable adcommon.h/g_common.h by default. |
105 |
|
- fixed problem for adjoint of global_max |
106 |
|
o modified verification/carbon/ |
107 |
|
o New setup for adjoint of global_ocean |
108 |
|
o added hooks for Eliassen Palm fluxes (dynamics.F, ini_fields.F) |
109 |
|
o cleaned TAF keys iikey, idkey (dynamics.F, thermodynamics.F) |
110 |
|
o incorporated hooks for sponge layer code (external_forcing.F) |
111 |
|
|
112 |
|
checkpoint45d_post |
113 |
|
o import 2 fixes from release1_p5 (CG2D.h & packages_readparms.F) |
114 |
|
o use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S |
115 |
|
(affects plume_on_slope "cg2d" output) |
116 |
|
o add new parameter deltaTfreesurf for free-surface time stepping |
117 |
|
o exchange gT,gS when using staggerTimeStep & GM & Oly<4 |
118 |
o NONLIN_FRSURF: rescale gNm1 to get a better conservation with A-B |
o NONLIN_FRSURF: rescale gNm1 to get a better conservation with A-B |
119 |
o change phiMin in exp1 (to agree with documentation) |
o change phiMin in exp1 (to agree with documentation) |
120 |
o add new flags: |
o add new flags: |