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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o pkg/exch2: |
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- in exch2*_get_rx[1,2]: use new list "W2_tileIndex" to replace search |
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through list of all tiles my proc owns. |
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o model/src: |
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- AUTODIFF only: in calc_adv_flow.F, recompute rTransKp (instead of copying |
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from rTrans) to simplify dependencies (no need to store rTrans anymore in |
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calling S/R); this affects AD results at machine truncation level: |
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update AD-output (TAF) of experiments: 1D_ocean_ice_column, |
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bottom_ctrl_5x5 & obcs_ctrl (12 digits for AD grad, same FWD grad). |
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o tools/build_options: |
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- simplify Warnings options (-ieee & -devel cases) in linux_amd64_gfortran |
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o coupling interface pkgs: |
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[compon_communic, atm_compon_interf & ocn_compon_interf] |
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- move declaration of local array "ibuf" out of header file "CPLR_SIG.h" |
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to each S/R that needs it; remove un-used variables. |
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- change component tile registration (cpl_register.F in both compon_interf |
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and mitcomponent_tile_register.F) to pass the full list of tiles |
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information (including bi,bj) in 1 vector (instead of in a bi,bj matrix). |
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- with pkg/exch2: adopt the same convention used for I/O to define mapping |
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towards coupler global array (unless W2_useE2ioLayOut=F): |
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a) can now use different tiling between atm & ocn comp. |
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b) no needs to modify the run-Off map when changing tiling (was needed |
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even if using the same tiling between atm & ocn). |
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c) will allow to run with blank-tiles in 1 component (e.g., for ocean |
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full land tiles); not yet tested. |
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- check for valid mapping from comp. tile to coupler global array |
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- improve report of tile registration results to log file. |
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o pkg/exch2: |
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- in eesupp/src/eeboot.F: move call to W2_EEBOOT before Coupler |
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tile-registration (CPL_REGISTER); |
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- activate (un-comment) definition and setting of "W2_tileIndex" list to |
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store the local bi,bj indices of each tile; |
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- also print bi,bj in local report to log file; |
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- fix pkg/debug/debug_cs_corner_uv.F for the case nSy > 1 (left from |
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Jun 2009 modif of pkg/exch2). |
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o testing on baudelaire: |
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- run 2 tests at a time: no significant slow down (since enough cpu) and |
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get the full set of test done earlier |
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- switch the ifort test to "-devel" ; run the OpenAD test everyday. |
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o model/src/thermodynamics.F and routines called from it: |
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- pkg/gmredi: gmredi_residual_flow.F (replacing gmredi_calc_uvflow.F & |
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gmredi_calc_wflow.F) to update eulerian velocity (input) into residual |
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velocity (outp) by adding bolus velocity. |
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- model/src: calc_adv_flow.F (replacing calc_common_factors.F) to compute |
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mass transport from velocity + lateral grid cell area |
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- rename calc_gt.F to temp_integrate.F (includes call to TIMESTEP_TRACER) |
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- rename calc_gs.F to salt_integrate.F (includes call to TIMESTEP_TRACER) |
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in thermodynamics.F |
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- remove k from thermodynamics.F and move it to temp_integrate.F |
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salt_integrate.F and ptracers_integrate.F (now done inside the tracer |
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loop). |
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- compute locally (in thermodynamics.F) 3-D velocity field that is used to |
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advect tracers; pass it as argument to GAD_ADVECTION, GAD_SOM_ADVECT, |
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PTRACERS_ADVECTION, TEMP_INTEGRATE, SALT_INTEGRATE, PTRACERS_INTEGRATE, |
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GAD_IMPLICIT_R and PTRACERS_IMPLICIT |
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- update AD-output (TAF & OAD) of experiments: 1D_ocean_ice_column, |
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global_ocean.90x40x15, tutorial_global_oce_biogeo and |
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tutorial_tracer_adjsens (+ TLM output). |
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o tools/OAD_support and (verification/*/) code_oad: |
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- OAD_support/cb2mGetModules.csh: add PACKAGES_CONFIG.h in header file to |
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module conversion ; remove unneeded CPP_EEOPTIONS.h. |
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- code_oad/CPP_OPTIONS.h: remove PACKAGES_CONFIG.h and use a more standard |
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version (closer to model/inc/CPP_OPTIONS.h). |
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o model/src: |
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- remove parameter "useOldFreezing" from PARAMS.h and push it to the |
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retired list of parameters (routine FREEZE has been replace by surface |
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freezing (10.yrs ago) and by pkg/frazil (interior freezing). |
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o pkg/gmredi: |
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- add option (GM_CALC_TRANSP_FROM_VEL) to compute transport directly from |
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velocity (same scheme but affects machine truncation) for GM_AdvForm. |
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- update output of FWD experiments: front_relax.bvp, |
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global_ocean.90x40x15.dwnslp, global_ocean.cs32x15 and ideal_2D_oce. |
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checkpoint64q (2013/11/17) |
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o verification: |
o verification: |
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- generate new output on baudelaire (gfortran, -ieee) for OpenAD experiments |
- generate new output on baudelaire (gfortran, -ieee) for OpenAD experiments |
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tutorial_global_oce_biogeo and global_ocean.90x40x15. |
tutorial_global_oce_biogeo and global_ocean.90x40x15. |
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