/[MITgcm]/MITgcm/doc/tag-index
ViewVC logotype

Diff of /MITgcm/doc/tag-index

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.1687 by gforget, Wed Jul 11 21:51:27 2012 UTC revision 1.1700 by heimbach, Tue Jul 31 18:11:51 2012 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/ctrl:
8      - new header file CTRL_SIZE.h for parameters maxCtrlArr2D, maxCtrlArr3D
9      - redefine CPP option ALLOW_BOTTOMDRAG_CONTROL to
10                            ALLOW_BOTTOMDRAG_CONTROL_NONGENERIC
11      - verification/hs94.1x64x5/ tests ALLOW_GENARR{2D,3D}_CONTROL
12    checkpoint63q (2012/07/30)
13    o pkg/autodiff:
14      note about monitor and snap-shot of ad-variables:
15      a) need to apply ADEXCH before monitor or output of ad-vars to include
16       overlap contributions (was done for adjDump but missing for monitor).
17      b) since ADEXCH implies adding overlap values to interior array, machine
18       truncation error is expected when adding an ADEXCH call in the middle of
19       the time-stepping (although mathematically identical).
20      modifs:
21      - fix some incorrect type (RL/RS, UV/scalar) in ADEXCH calls and ad-vars
22        declaration (adEddyPsiX,adEddyPsiY in adcommon.h).
23      - add new run-time params (dumpAdVarExch & mon_AdVarExch) to select how  to
24        apply ADEXCH before monitor or snap-shot of ad-variables:
25           =0 : no ADEXCH ; =1 : do ADEXCH ; =2 : apply ADEXCH on a local copy.
26      - implement new method (copy+adexch) for snap-shot and monitor of main model
27        ad-vars (initially not used by default -> output unchanged).
28      - change default (set to 2) to use new method and update few output_adm.txt
29        with accurate ad-monitor (global_ocean.90x40x15, tutorial_global_oce_biogeo
30        and both tutorial_tracer_adjsens tests).
31      - switch 2 global_ocean.cs32x15 AD-tests to AB-2 (seaice_dynmix & thsice)
32        and turn off momDissip_In_AB in the 2 other (needed for stable AB-3).
33    o pkg/ctrl:
34      enable the use of a variable number (maxCtrlArr2D, maxCtrlArr3D) of
35      generic control variables via
36      #define ALLOW_GENARR2D_CONTROL and/or #define ALLOW_GENARR3D_CONTROL
37      Only required customization should be S/R ctrl_map_ini_genarr.F
38      (routine in repository contains example)
39    o pkg/exf:
40      - fix and refine checking of surface-relaxation setting when using EXF
41    o verification (adjoint exp):
42      - reduce length of simulation by half for experiment global_ocean.cs32x15
43        (std, seaice & seaice_dynmix) and exp tutorial_dic_adjoffline; update output.
44    o pkg/mom_common (mom_u/v_bottomdrag), pkg/shelfice (shelfice_u/v_drag)
45      - replace if statements KE.ne.0 with KE.gt.0 to avoid sqrt of negative numbers
46        of KE that can occur with aggressive optimization
47      + put quadratic bottom drag calculation in separated loops (only done if
48        using bottomDragQuadratic)
49    o model/src: CG2D_NSA
50      - clean-up:  stop if cg2dNormaliseRHS=T and AUTODIFF
51         and replace GLOBAL_SUM calls with GLOBAL_SUM_TILE.
52      - in test-exp that uses CG2D_NSA (bottom_ctrl & tutorial_tracer_adjsens),
53         change cg2d residual target to be expressed in Wunits (=> do not normalise
54         RHS ; this fix global_max Pb with TAF); update output.
55    o verification/tutorial_tracer_adjsens:
56       improve parameter consistency (and get rid of warnings):
57       - use deltaTFreeSurf=deltaTtracer (better with NonLin FreeSurf);
58       - switch Temp Adv Scheme from 81 to 80 (no limiter since theta < 0 is physical)
59       - use staggerTimeStep (for stability) in som81; use default rotation period.
60    o pkg/exch2:
61      - with empty facet: fix compact-format (W2_mapIO=1) definition (was previously
62        reset to 0 = 1 long line in X)
63    o pkg/mdsio:
64      - fix reading of dimensions from meta file for large-size domain
65    o model/src:
66      - fix saltIsActiveTr setting for IdealGas eosType (eosType is 6 character long);
67      - to refine CS-grid check, add logical flag "hasWetCSCorners": true if using
68        Cubed-Sphere Exch with CS-corners inside the domain;
69        make new S/R INI_GLOBAL_DOMAIN from code in ini_linear_phisurf.F to calculate
70        globalArea and to set hasWetCSCorners.
71      - add warning if usingCurvilinearGrid and momAdvection in flux-form (missing
72        metric terms); stop if hasWetCSCorners=T and momAdvection in flux-form.
73      - re-activate the stop if useCDscheme and hasWetCSCorners=T (previously if
74        useCDscheme and useCubedSphereExchange).
75    o pkg/seaice/seaice_growth.F :
76      - compute the SEAICE_DISABLE_HEATCONSFIX term accordingly
77        for the (.NOT.useRealFreshWaterFlux).OR.(nonlinFreeSurf.EQ.0)
78        when the previous code was not correct.
79      - in all cases diagnoze the boundary condition mismatch to SIaaflux
80      - in the case of useRealFreshWaterFlux.AND.(nonlinFreeSurf.GT.0) add
81        that term to QNET (essentially to set the melt/freeze water to 0degC).
82        when SEAICEheatConsFix is true, so that the ocean+ice budget heat is closed.
83  o verification/global_ocean.cs32x15/input.seaice :  o verification/global_ocean.cs32x15/input.seaice :
84   - add SEAICEheatConsFix in data.seaice, ensuring closed ocean+ice heat budget.    - add SEAICEheatConsFix in data.seaice, ensuring closed ocean+ice heat budget.
85   - add diagnostics (commented out) for budget test using my matlab codes (gcmfaces).    - add diagnostics (commented out) for budget test using my matlab codes (gcmfaces).
86   - update results (output.seaice.txt) accordingly.    - update results (output.seaice.txt) accordingly.
87  o verification/lab_sea/input/data.seaice :  o verification/lab_sea/input/data.seaice :
88   - remove SEAICEheatConsFix, which is now be tested    - remove SEAICEheatConsFix, which is now be tested
89     in global_ocean.cs32x15. The presently coded fix      in global_ocean.cs32x15. The presently coded fix
90     is only consistent with real fresh water + nlfs.      is only consistent with real fresh water + nlfs.
91   - update results (output.txt) accordingly.    - update results (output.txt) accordingly.
92  o pkg/salt_plume: added diagnotic for salt tendency (oceSPtnd).  o pkg/salt_plume: added diagnotic for salt tendency (oceSPtnd).
93  o AD_CONFIG.h file:  o AD_CONFIG.h file:
94   - in genmake2: remove "#undef ALLOW_ECCO_OPTIMIZATION" from AD_CONFIG.h;    - in genmake2: remove "#undef ALLOW_ECCO_OPTIMIZATION" from AD_CONFIG.h;
95   - remove #include "AD_CONFIG.h" from all included OPTIONS files and    - remove #include "AD_CONFIG.h" from all included OPTIONS files and
96     add it explicitly in each fortran src file where it is needed.      add it explicitly in each fortran src file where it is needed.
97     motivation: header file AD_CONFIG.h is generated/modified after "make depend"      motivation: header file AD_CONFIG.h is generated/modified after "make depend"
98     thus introducing potentially wrong dependency; therefore, better to include      thus introducing potentially wrong dependency; therefore, better to include
99     it only where it's really needed, and after any other included OPTIONS file      it only where it's really needed, and after any other included OPTIONS file
100     (less tempting to bring conditional includes according to ALLOW_ADJOINT_RUN      (less tempting to bring conditional includes according to ALLOW_ADJOINT_RUN
101     or ALLOW_TANGENTLINEAR_RUN).      or ALLOW_TANGENTLINEAR_RUN).
102    
103  checkpoint63p (2012/07/06)  checkpoint63p (2012/07/06)
104  o pkg/autodiff:  o pkg/autodiff:
Legend:
Removed from v.1.1687  
changed lines
  Added in v.1.1700
  ViewVC Help
Powered by ViewVC 1.1.22