1 |
heimbach |
1.53.2.14 |
$Header: /u/gcmpack/MITgcm/doc/tag-index,v 1.53.2.13 2002/11/07 17:34:09 heimbach Exp $ |
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cnh |
1.1 |
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Notes on tags used in MITgcmUV |
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============================== |
5 |
heimbach |
1.53.2.14 |
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release1_p8 |
7 |
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o verification/natl_box: |
8 |
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updating new external_fields_load routine |
9 |
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o New package: pkg/seaice |
10 |
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Sea ice model by D. Menemenlis (JPL) and Jinlun Zhang (Seattle). |
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The sea-ice code is based on Hibler (1979-1980). |
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Two sea-ice dynamic solvers, ADI and LSR, are included. |
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In addition to computing prognostic sea-ice variables and diagnosing |
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the forcing/external data fields that drive the ocean model, |
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SEAICE_MODEL also sets theta to the freezing point under sea-ice. |
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The implied surface heat flux is then stored in variable |
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surfaceTendencyTice, which is needed by KPP package (kpp_calc.F and |
18 |
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kpp_transport_t.F) to diagnose surface buoyancy fluxes and for the |
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non-local transport term. Because this call precedes model |
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thermodynamics, temperature under sea-ice may not be "exactly" at |
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the freezing point by the time theta is dumped or time-averaged. |
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N.B.: fairly large differences in accuracy occur across |
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different platforms; comparison between |
24 |
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g77 (Linux) and ??? generated output gives: |
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T S U V |
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C D M c m s m s m s m s |
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n p a R g m m e . m m e . m m e . m m e . |
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f n k u 2 i a a d i a a d i a a d i a a d |
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g d e n d n x n . n x n . n x n . n x n . |
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Y Y Y Y 5 5 7 7 7 8 10 9 6 6 6 6 7 5 7 5 7 FAIL lab_sea |
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33 |
heimbach |
1.53.2.12 |
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34 |
heimbach |
1.53.2.13 |
release1_p7 |
35 |
heimbach |
1.53.2.12 |
o GAD: |
36 |
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- generated new common blocks to account for call of |
37 |
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same gad routines with differing traceridentities |
38 |
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(needed to modify tracerIdentity indices in GAD.h) |
39 |
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- generated separate common blocks for case useCubedSphereExchange |
40 |
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(Department of Futurology) |
41 |
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- parameter lists to gmredi_?transport: added tracerIdentity |
42 |
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- added new key indices to tamc.h |
43 |
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o external_fields_load: |
44 |
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- added this routine to TAF list |
45 |
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- needed to make some common blocks global and additional storing |
46 |
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along the same lines as exf package (checkpoint_lev?_directives.h) |
47 |
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o exf: |
48 |
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updated external forcing package |
49 |
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- bug fixes carried over from ecco-branch |
50 |
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(missing OBCS_OPTIONS.h in two routines) |
51 |
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- enable easy to use "no forcing". |
52 |
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- added exf I/O for atmospheric loading |
53 |
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- added exf I/O for runoff data |
54 |
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- transfered scaling between exf <-> MITgcm to exf namelist |
55 |
heimbach |
1.53.2.13 |
o Adding new verification experiment global_with_exf. |
56 |
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This verification experiment is almost identical to the |
57 |
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global_ocean.90x40x15 experiment, except that it uses |
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the exf (and cal) package instead of the |
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external_fields_load routine (cf README file). |
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mlosch |
1.53.2.11 |
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61 |
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release1_p6 |
62 |
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o fixed the verification/global_ocean.90x40x15 experiment: |
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- new bathymetry (the world according to A., JMC, and M.) |
64 |
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- new initial fields and forcing fields (*.bin files) |
65 |
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- new POLY3.COEFFS (for the next release one should switch to a full |
66 |
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equation of state) |
67 |
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- fixed several errors and redundancies in the data file |
68 |
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- experiment uses looped cells |
69 |
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- added matlab directory with diagnostic scripts for plotting of output |
70 |
heimbach |
1.53.2.9 |
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71 |
heimbach |
1.53.2.10 |
release1_p5 |
72 |
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o import recent fix from MAIN branch: |
73 |
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- use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S |
74 |
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- change phiMin in exp1 (to agree with documentation) |
75 |
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from checkpoint45 to checkpoint45a_post: |
76 |
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- specific exchange for X-slice domain (case Ny=1) |
77 |
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- argument futureIter of S/R obcs_calc missing in |
78 |
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exp4 & internal_wave /code |
79 |
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- solve_for_pressure : set cg2d_x to zero where OBCS are applied |
80 |
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from checkpoint44f_post to checkpoint44g_post: |
81 |
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- fix surface correction term in multiDimAdvection |
82 |
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(affects plume_on_slope results |
83 |
heimbach |
1.53.2.9 |
o bug fix in packages_readparms (missing ALLOW_CALENDAR) |
84 |
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o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM |
85 |
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o Adjoint-related bug fixes in kpp: |
86 |
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- kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix |
87 |
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- kpp_routines: store of Rib avoids partial recomputation bug of TAF. |
88 |
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o added Eliassen-Palm flux hooks (dynamics,ini_fields) |
89 |
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o removed unused TAF keys iikey, idkey (dynamics,thermodynamics) |
90 |
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o flow directives: |
91 |
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- new for S/R do_the_model_io |
92 |
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- enhanced for S/R checkpoint |
93 |
heimbach |
1.53.2.10 |
o added Eliassen Palm flux controls to gradient check package |
94 |
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o new ctrl package |
95 |
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- adopted from ECCO environment to enable optimization |
96 |
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- added Eliassen Palm fluxes to controls |
97 |
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- adjusted global_ocean.90x40x15/ and carbon/ accordingly |
98 |
heimbach |
1.53.2.8 |
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99 |
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release1_p4 |
100 |
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o Removed f90 comments ("!") |
101 |
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o Modified initialisations to enable exf package for MITgcm |
102 |
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(without invoking ECCO_PACKAGE). |
103 |
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o modifications to gradient check package (Martin Losch) |
104 |
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- enable centered differences |
105 |
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- modified format of standard output |
106 |
heimbach |
1.53.2.5 |
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107 |
heimbach |
1.53.2.7 |
release1_p3 |
108 |
heimbach |
1.53.2.5 |
o added tangent linear setup to verification/carbon/ |
109 |
heimbach |
1.53.2.6 |
o added adjoint sensitivity setup to verification/global_ocean... |
110 |
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o moved packages_init_variables before convective_adjustment |
111 |
heimbach |
1.53.2.7 |
o output of verif. which use GMRedi brought up-to-date with |
112 |
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MAIN trunk (those were re-created after changes in GMRedi) |
113 |
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o included CPP option SINGLE_LAYER_MODE |
114 |
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to configure barotropic setup (Martin Losch). |
115 |
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o Removed auxiliary variable in impldiff |
116 |
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(caused numerical differences with MAIN trunk routine). |
117 |
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o Introduced CPP option ALLOW_AUTODIFF_MONITOR to |
118 |
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disable adcommon.h/g_common.h by default. |
119 |
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o Cleaned exchange calls in cg2d. |
120 |
heimbach |
1.53.2.2 |
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121 |
heimbach |
1.53.2.4 |
release1_p2 |
122 |
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o fixed array boundary problem for adjoint |
123 |
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(related to partial recomputation within subroutine |
124 |
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related to dynamics -> calc_viscosity -> mom_... |
125 |
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o fixed recomputation in thermodynamics |
126 |
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o prepare (but not complete) recomputation problem in impldiff |
127 |
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o fixed problem for adjoint of global_max |
128 |
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o switched off sponge layer code in external_forcing |
129 |
heimbach |
1.53.2.3 |
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130 |
heimbach |
1.53.2.4 |
release1_p1 |
131 |
heimbach |
1.53.2.3 |
o merged necessary patches: |
132 |
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- AD-related changes for GMRedi |
133 |
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- fixes i KPP (delZ -> drF) |
134 |
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- hook to OBCS songe layer code in external_forcing |
135 |
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- errorMessageUnit non-zero in eeboot.F |
136 |
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- modified test cost function and carbon verif. |
137 |
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138 |
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release1_chkpt44d_post = chkpt44d_post |
139 |
heimbach |
1.53.2.2 |
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140 |
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chkpt44d_pre,post |
141 |
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o added missing EXCLUDE_MONITOR flags |
142 |
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o changed "e" to "_d" in gmredi_slope_limit, gmredi_slope_psi |
143 |
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(incompatible typ in MIN/MAX expressions caused problems |
144 |
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on IBM SP3) |
145 |
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o in genmake added variable MAKEDEPEND |
146 |
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plus resetting for case SunOS |
147 |
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o added timer_stats.c routine for IBM SP3 |
148 |
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o removed variables in dynamics |
149 |
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150 |
heimbach |
1.53.2.3 |
o real fresh water flux implemented with non-linear free-surface. |
151 |
heimbach |
1.53.2.2 |
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152 |
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chkpt44c_pre,post |
153 |
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o few fix (mask in shap_s2, EmPmR in external_field_load, |
154 |
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USE_NATURAL_BCS in solve_for_P); |
155 |
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o add arguments myIter & myTime to S/R obcs_calc & solve_for_P |
156 |
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157 |
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checkpoint44b_pre/_post |
158 |
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o merge of relevant stuff from the ecco-branch: |
159 |
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- genmake: removed $S64 overwrite for case SunOS |
160 |
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- pkg/exf: update and corrections for field swapping and obcs |
161 |
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- pkg/ecco: parameter lists for the_model_main, the_main_loop |
162 |
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harmonized between ECCO and MITgcm |
163 |
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- pkg/autodiff: added flow directives for obcs, mdsio_gl_slice |
164 |
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updated checkpointing_lev... lists for obcs |
165 |
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- model/src: minor changes in forward_step, plot_field |
166 |
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added directive for divided adjoint in the_main_loop |
167 |
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- pkg/mdsio: added mdsio_gl_slice |
168 |
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169 |
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o check parameters & config (chkpt44a_pre,post) |
170 |
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o OBC and NonLin_FrSurf. |
171 |
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172 |
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checkpoint44 |
173 |
adcroft |
1.53.2.1 |
o fix bug in mom_vi_del2uv |
174 |
heimbach |
1.53.2.2 |
o select when filters are applied ; add options to zonal_filter (data.zonfilt) |
175 |
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o gmredi: fix Pb in the adiabatic form ; add options (.e.g. Bolus advection) |
176 |
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o update AIM experiments (NCEP input files) |
177 |
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o improve and extend diagnostics (Monitor, TimeAve with NonLin-FrSurf) |
178 |
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o added some stuff for AD |
179 |
adcroft |
1.53 |
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180 |
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checkpoint43 |
181 |
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o added two new advection tests |
182 |
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o added global 4x4 degree ocean test |
183 |
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o added test of H&S94 with free surface on cube |
184 |
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o some final mods for gradient check, adjoint,... |
185 |
heimbach |
1.52 |
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186 |
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checkpoint42 |
187 |
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Fixed AD-related problems: |
188 |
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o Store directives up-to-date with re-arranged Adams-Bashforth |
189 |
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(mainly thermodynamics.F) |
190 |
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o New store directives for multi-dim. advection schemes |
191 |
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* new CPP flag ALLOW_MULTI_DIM_ADVECTION |
192 |
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* new common block and key passkey |
193 |
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(mainly gad_advection.F) |
194 |
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o Modified store directives for split of dynamics/thermodynamics |
195 |
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for the case ALLOW_KPP |
196 |
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o Cleaned argument list for timestep_tracer.F |
197 |
adcroft |
1.51 |
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198 |
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checkpoint41 |
199 |
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o re-formatted/added comments in prologues of key subroutines |
200 |
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to work with protex |
201 |
heimbach |
1.47 |
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202 |
adcroft |
1.50 |
checkpoint40 |
203 |
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o moved calc_gs, calc_gt and calc_tr1 back to model/src |
204 |
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o added FLT (floats) package from Arne along with demo. experiment |
205 |
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o re-arranged Adams-Bashforth scheme for tracers to allow easier |
206 |
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implementation of forward-in-time forcing terms |
207 |
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o more mods for non-linear free-surface including new variable |
208 |
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o modified multi-dim method to work on cube |
209 |
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o bug fix in KPP (from DM) |
210 |
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211 |
adcroft |
1.49 |
checkpoint40pre9 |
212 |
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o added DST advection schemes |
213 |
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o fix MPI bug on SGI's |
214 |
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o modifications for non-linear free-surface |
215 |
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o fixed conditionals for fixed flow/passive tracer only mode |
216 |
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o added tension/strain form of stress tensor |
217 |
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o changes to commenting of arguments for TAF/TAMC |
218 |
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o added/updated many matlab scripts |
219 |
adcroft |
1.50 |
o added multi-dimensional advection method for tracers |
220 |
adcroft |
1.49 |
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221 |
adcroft |
1.48 |
checkpoint40pre8 |
222 |
heimbach |
1.47 |
o new package rw/ |
223 |
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Added method for dumping intermediate local arrays: |
224 |
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mdsio_writetile - same as mdsio_writefield except works from inside |
225 |
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bi,bj loop |
226 |
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mdsio_writelocal - same as mdsio_writetile except works for local |
227 |
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arrays |
228 |
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write_local_r? - higher-level wrapper for mdsio_writelocal |
229 |
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Controlled by diagFreq. Defaults to zero (ie. no dumps) |
230 |
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Example given at end of mom_vecinv.F that dumps some local arrays. |
231 |
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o replaced calc_mom_rhs.F by mom_fluxform.F/mom_vecinc.F to |
232 |
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control flux-form versus vector invariant code. |
233 |
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Switch is runtime flag vectorInvariantMomentum (defaults to false) |
234 |
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or genmake -DISABLE ... |
235 |
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o TAMC-related update to cope with mom_fluxform.F/mom_vecinc.F |
236 |
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(additional storing is now needed for case vecinv; |
237 |
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currently nothing implemented to switch this storing off |
238 |
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in case fluxform is used since no CPP flag available). |
239 |
heimbach |
1.46 |
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240 |
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checkpoint40pre7 |
241 |
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o bug fix in dynamics.F |
242 |
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calc_viscosity called before k=1,Nr loop. |
243 |
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o added some #ifdef's ALLOW_PASSIVE_TRACER |
244 |
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o cleaned initialisations in ctrl_map_ini |
245 |
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related to TAF |
246 |
heimbach |
1.45 |
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247 |
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checkpoint40pre6 |
248 |
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o split dynamics into thermodynamics & dynamics |
249 |
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o corresponding split of calc_diffusivity into |
250 |
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calc_diffusivity, calc_viscosity |
251 |
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(kpp_calc_diff, kpp_calc_visc). |
252 |
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o Added diffkr, kapgm to control variables |
253 |
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o bug fix in gmredi_slope_limit for ldd97 |
254 |
adcroft |
1.44 |
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255 |
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checkpoint40pre5 |
256 |
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o proper initialization of Adams-Bashforth time stepping |
257 |
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+ uses forward step for very first step of model (iter=0) |
258 |
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o re-generated *all* output since almost all output is modified by this |
259 |
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change (sorry but we've been putting this one off for about 2 years) |
260 |
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+ natl_box, aim.5l_Equatorial_Channel and aim.5l_zon-ave were |
261 |
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*not* regenerated since they are already out of date and I don't |
262 |
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want to create the impression that they are suddenly working. |
263 |
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o removed KAP stuff for DEC's |
264 |
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o modified/added many .cvsignore files in */code and */input |
265 |
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o added new expt "solid-body.cs-32x32x1" |
266 |
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+ this uses an alternative form of ini_curvilinear_grid.F which |
267 |
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is not necessarily any better than the current one... |
268 |
heimbach |
1.43 |
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269 |
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checkpoint40pre4 |
270 |
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o added re-initialisations of utrans,vtrans,rtrans in |
271 |
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calc_common_factors which are crucial for TAF. |
272 |
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o extended iMin,jMin range for calc_common_factors, |
273 |
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calc_diffusivity |
274 |
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o added option ALLOW_PASSIVE_TRACER |
275 |
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o a few minor updates and fixes |
276 |
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277 |
heimbach |
1.42 |
checkpoint40pre3 |
278 |
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o created calc_gtr1.F for gad package |
279 |
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o split the_main_loop and re-introduced forward_step |
280 |
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o some recomputations of nIter0 for TAMC |
281 |
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282 |
heimbach |
1.41 |
checkpoint40pre2 |
283 |
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o Updated to latest branch of AJA, JMC |
284 |
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o Added gradient check package |
285 |
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o Added routines for passive tracer handling |
286 |
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o Added carbon sequestration sensitivity experiment |
287 |
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288 |
heimbach |
1.39 |
checkpoint39 |
289 |
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o Modifications and fixes to support TAMC |
290 |
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(mainly missing or wrong directives) |
291 |
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o Corrected common blocks when fooling TAMC to produce adjoint I/O |
292 |
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in addummy_in_stepping |
293 |
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o Updated verification/vero/ (bug fixes in code/, correct pickups in input/) |
294 |
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o Enabled "sliced" (xz-,yz-) exchanges, needed for obcs. |
295 |
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o Included following packages: |
296 |
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cal: calendar |
297 |
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exf: external forcing |
298 |
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ecco: essential routines to control use of cal, exf |
299 |
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(NB: this is not the full ECCO environment) |
300 |
heimbach |
1.40 |
o disabled some packages by default in genmake |
301 |
heimbach |
1.39 |
|
302 |
heimbach |
1.38 |
checkpoint38 |
303 |
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o see notes_c37_adj.txt |
304 |
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o corrected wrong layer index in external_forcing_t |
305 |
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o replaced the_main_loop/forward_step by the_main_loop |
306 |
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o removed forceoutput from write_state |
307 |
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(replaced criteria for initial/final state) |
308 |
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o added runtime flag for pre-C35 pickups: usePickupBeforeC35 |
309 |
jmc |
1.36 |
|
310 |
jmc |
1.37 |
checkpoint37 |
311 |
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o mdsio.F routine split and packaged in pkg/mdsio |
312 |
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(mdsio.F and mdsio_gl.F still exist in eesupp/src but are not |
313 |
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used unless genmake -disable=mdsio) |
314 |
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o allow a more precise surface-geopotential gradient for the atmosphere |
315 |
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taking into account the change in space of Alpha (=1/rho) at the surface. |
316 |
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o variable "etaN" (replace cg2d_x) is the surface R-anomaly [r unit] |
317 |
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(ocean: sea surface height [m] / atmos: surface pressure anomaly [Pa]) |
318 |
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o Change units: Phi_Hydrostatic (=phiHyd), Phi_Surface(=cg2d_x) and |
319 |
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Phi_NonHydrostatic (=cg3d_x), all have now the dimension of a potential |
320 |
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[m2/s2] (pressure/rhoConst in the ocean ; Geo-Potential in the atmosphere). |
321 |
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o Time-Average diagnostics defined as a pseudo package "timeave". |
322 |
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o pickup files : old pickup (before c35) did not work with new code (c35 |
323 |
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and after) unless activating 2 commented lines in initialise-varia. |
324 |
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o Non-Hydrostatic pickup file Pb fixed. |
325 |
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o bug with Rigid-lid version (since c35) fixed. |
326 |
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|
327 |
jmc |
1.36 |
checkpoint36 |
328 |
jmc |
1.37 |
o implement Crank-Nickelson barotropic time-stepping |
329 |
jmc |
1.36 |
o recover Time-Average diagnostics |
330 |
|
|
o fix Pb in checkpoint (PR#19) |
331 |
|
|
o AIM become a standard package ; clean unused CPP_kees |
332 |
jmc |
1.35 |
|
333 |
|
|
checkpoint35 |
334 |
|
|
o subtantial rewrite of dynamics.f |
335 |
|
|
o allows staggered time-stepping |
336 |
|
|
o packaged obcs, aim (Atmospheric Physics), zonal_filt, shap_filt |
337 |
|
|
o added bottom drag (linear + quadratic) |
338 |
heimbach |
1.33 |
|
339 |
|
|
checkpoint34 |
340 |
|
|
o Modified exchange routines for correct reverse simulation. |
341 |
|
|
o Added verification output to comply with bug fix in impldiff.F |
342 |
|
|
as of c33 (exp2, natl_box). |
343 |
|
|
o Corrected store directives in dynamics.F |
344 |
|
|
o Corrected array boundaries in impldiff.F |
345 |
|
|
o Corrected array dimensions in gmredi. |
346 |
|
|
Added temporary scalars to avoid storage by TAMC (gmredi, kpp). |
347 |
heimbach |
1.34 |
o Added routine GLOBAL_SUM_INT to global_sum.F |
348 |
heimbach |
1.33 |
o Added mdsio_gl.F for ECCO purposes. |
349 |
adcroft |
1.32 |
|
350 |
|
|
checkpoint33 |
351 |
|
|
o Fixed bug in lower BC in impldiff.F |
352 |
|
|
o Fixed confusion about units of forcing arrays in FFIELDS.h |
353 |
|
|
namely Fu,Fv,Qnet,Qsw,EmPmR: |
354 |
|
|
- Removed verification/natl_box/code/external_fields_scale.F |
355 |
|
|
(did not differ from that in model/src) |
356 |
|
|
- Changed units of fu,fv,Qnet,Qsw,EmPmR back to proper units |
357 |
|
|
(see FFIELDS.h for description) |
358 |
|
|
- Scale fu,fv,Qnet,Qsw,EmPmR when used in external_forcing_surf.F, |
359 |
|
|
kpp_calc.F and kpp_transport_t.F |
360 |
|
|
- Removed model/src/external_fields_scale.F and calls to it |
361 |
|
|
- verification/natl_box uses flux data with "atmospheric" sign so |
362 |
|
|
a special version of external_fields_load.F is used to |
363 |
|
|
change the data as it's read in. This way, the arrays |
364 |
|
|
have the right units and signs at all times tha a user could |
365 |
|
|
possibly use them. |
366 |
|
|
o Corrected genmake to delete a temporary file during configuration |
367 |
heimbach |
1.31 |
|
368 |
|
|
checkpoint32 |
369 |
|
|
o Scaling of forcing fields moved from external_forcing.F to |
370 |
|
|
external_fields_scale.F, called directly after loading fields. |
371 |
|
|
o Surface relaxation terms added to surface tendency fields in |
372 |
|
|
extra subroutine. |
373 |
|
|
o impldiff.F changed to avoid storing by TAMC of huge intermediate |
374 |
|
|
fields. |
375 |
|
|
o Changes in GMRedi to comply with packaging structure. |
376 |
|
|
o Modifications and bug fixes in KPP package. |
377 |
|
|
o Verification experiment for KPP added (verification/nat_box/) |
378 |
heimbach |
1.30 |
|
379 |
|
|
checkpoint31 |
380 |
|
|
o Packages interface brought in line with defined standard |
381 |
|
|
-> new routines packages_...F |
382 |
|
|
-> changes in initialise_fixed.F, initialise_varia.F |
383 |
|
|
-> enables initialisation interface for ECCO package |
384 |
|
|
o Rescaling of external forcing fields immediately after read |
385 |
|
|
(removed from external_forcing.F) |
386 |
|
|
-> new: surface_fields_scale.F |
387 |
|
|
-> affects ini_foorcing.F, external_fields_load.F |
388 |
|
|
o Computation of surface tendencies before tendency updates. |
389 |
|
|
-> new: external_forcing_surf.F |
390 |
|
|
o Change of variable names useGMRedi, useKPP, useECCO |
391 |
|
|
o Further changes in dynamics.F, impldiff.F for TAMC |
392 |
|
|
o Tested for experiments 0, 2, 4. |
393 |
|
|
- not yet tested for GMRedi. |
394 |
|
|
- not yet tested for KPP. |
395 |
adcroft |
1.29 |
|
396 |
|
|
checkpoint30 |
397 |
|
|
o Updates for OBCs |
398 |
|
|
o New experiment for test OBCs (internal_wave) |
399 |
|
|
o New output.txt in verification/exp4/results/ |
400 |
|
|
o Updates for KPP: calculation of viscosity corrected, new variables |
401 |
|
|
kpp_dumpFreq and kpp_taveFreq |
402 |
|
|
o CPP'd calls to system routines for TARGET_CRAY_VECTOR (P.H.) |
403 |
|
|
and entry for T90 in genmake |
404 |
adcroft |
1.28 |
|
405 |
|
|
checkpoint29 |
406 |
|
|
o packaged KPP and GM/Redi |
407 |
heimbach |
1.27 |
|
408 |
|
|
checkpoint28 |
409 |
|
|
o Corrected initialization of hFacMin for difference vertical coordinates |
410 |
|
|
o Modified calculation of partial cell thickness to more robust algorithm |
411 |
|
|
o config_summary.F: replaced write_1D_... by write_0D_... |
412 |
|
|
read_write.F: added subroutines write_0D_... |
413 |
|
|
o routines calc_common_factors, calc_gs, calc_gt, calc_phi_hyd, find_rho: |
414 |
|
|
included some initialisations required for TAMC. |
415 |
|
|
o routine calc_isoslopes: modified sqrt computation to make it |
416 |
|
|
differentiable for zero argument. |
417 |
|
|
o routines dynamics, impldiff: |
418 |
|
|
included store directives and tape key computations required for TAMC. |
419 |
|
|
o ALL TAMC related changes are between ifdef ALLOW_AUTODIFF_TAMC |
420 |
adcroft |
1.26 |
|
421 |
|
|
checkpoint27 |
422 |
|
|
o fixed calc_isoslopes() to so that cancellation of terms in tensor |
423 |
|
|
formulation works properly with variable resolution. |
424 |
|
|
o restructured the calling tree between the_model_main() and dynamics() |
425 |
|
|
o split initialise() into initialise_fixed() and initialise_varia() |
426 |
|
|
o introduced initialization file pSurfInitFile for free surface (cg2d_x) |
427 |
|
|
in new routine ini_psurf() |
428 |
adcroft |
1.25 |
|
429 |
|
|
checkpoint26 |
430 |
|
|
o moved some #ifdef in optional routines to encompass everything |
431 |
|
|
except the argument declarations. This was using up some memory. |
432 |
|
|
o fixed macros like _ADT to work with both versions of Linux cpp |
433 |
|
|
o cleaned up some unused and uninitialized variables |
434 |
|
|
(helps when debugging with strict compile options) |
435 |
|
|
o split up CPP_EEOPTIONS.h into options and macros |
436 |
|
|
(macros are now in eesupp/inc/CPP_EEMACROS.h) |
437 |
|
|
o patch for 2 processor JAM mode |
438 |
adcroft |
1.24 |
|
439 |
|
|
checkpoint25 |
440 |
|
|
o updates for OBCs and NH |
441 |
|
|
o dramatically reduced memory usage |
442 |
|
|
o added "JAM" routines for use on Artic network |
443 |
|
|
o parameterization of convection by implicit vertical diffusion |
444 |
|
|
o added a diagnostic of convective index |
445 |
|
|
o moved call to calc_divg_hat() from dynamics() to solve_for_pressure() |
446 |
|
|
(this is was partly for OBCs and NH but also in anticipation of |
447 |
|
|
an explicit free-surface option) |
448 |
|
|
o initial state input files for U and V |
449 |
adcroft |
1.23 |
|
450 |
|
|
checkpoint24 |
451 |
|
|
o Removed some spurious "REAL"s |
452 |
|
|
o Updated KPP to latest version from JPL |
453 |
|
|
o Added a COS(latitude) in horizontal viscosity |
454 |
adcroft |
1.22 |
|
455 |
|
|
checkpoint23 |
456 |
|
|
o Added del^4 diffusion for salt and temperature |
457 |
|
|
o Multiple minor fixes (implicit none's, arguments to global_sum, etc.) |
458 |
adcroft |
1.21 |
|
459 |
|
|
checkpoint22 |
460 |
|
|
o Made many small changes: implicit none, format(i5), etc... |
461 |
|
|
o Introduced KPP mixing scheme (compiles and runs but *not* tested) |
462 |
adcroft |
1.20 |
|
463 |
|
|
checkpoint21 |
464 |
|
|
o Introduced new I/O package that supports direct-access records (mdsio.F) |
465 |
|
|
o Split-up mid-level I/O routines |
466 |
|
|
o Updated input data for experiments 0,1,2,4 and 5 |
467 |
|
|
o Finally removed the genmake.* scripts (everyone seems happy with genmake) |
468 |
adcroft |
1.18 |
|
469 |
adcroft |
1.19 |
checkpoint20 |
470 |
|
|
o Tidied up open-boundaries some more |
471 |
|
|
o Added non-hydrostatic code |
472 |
|
|
o Fixed some input data |
473 |
|
|
o Modified MPI start-up to work in "coupled" context. |
474 |
|
|
|
475 |
adcroft |
1.18 |
checkpoint19 |
476 |
|
|
o Tidied up directory structure for verification experiments. |
477 |
|
|
o Added new code for open boundaries. |
478 |
|
|
o Corrected advective terms near boundaries. |
479 |
|
|
o Added CPP flag for "old UV" geometry and corrected spherical geometry. |
480 |
|
|
o Implemented free-slip/no-slip BCs and del^4 dissipation. |
481 |
adcroft |
1.19 |
o Split default parameters out of ini_parms.F into set_defaults.F. |
482 |
cnh |
1.17 |
|
483 |
|
|
checkpoint18 |
484 |
|
|
o Further changes for optional code generation with |
485 |
|
|
CPP - ugh! |
486 |
cnh |
1.16 |
|
487 |
|
|
checkpoint17 |
488 |
|
|
o Beginning to incorporating modularity |
489 |
|
|
for supporting atmos. and ocean configs. |
490 |
|
|
o Small changes for TAMC complinace |
491 |
|
|
o New ultra simple test case. Barotropic box |
492 |
|
|
configuration "exp0". |
493 |
cnh |
1.15 |
|
494 |
|
|
checkpoint16 |
495 |
|
|
o Minor changes to exchange routines to support |
496 |
|
|
accumulation in reverse mode. Adjoint of an |
497 |
|
|
assignment is an addition. |
498 |
|
|
o Changes to support compilation by TAMC (LR(1) |
499 |
|
|
syntax) and by g77 under Linux ( 72 character |
500 |
|
|
limit ). |
501 |
cnh |
1.14 |
|
502 |
|
|
checkpoint15 |
503 |
|
|
Rewrote exchange routines to allow |
504 |
|
|
o General tile <-> tile connectivity. |
505 |
|
|
o TAMC reverse mode flag ( is this really needed? ) |
506 |
|
|
o Variable width overlap and exchange region widths. |
507 |
|
|
o Hooks for sharing data via DMA, Arctic, Memory Channel, |
508 |
|
|
shmput/shmget, VIA, SYSV shmem and every other cool |
509 |
|
|
communication method. |
510 |
cnh |
1.13 |
|
511 |
|
|
checkpoint14 |
512 |
|
|
Consistent isomorphism chages made. These allow dynamical core |
513 |
|
|
to support both pressure and meters as a vertical coordinate. |
514 |
cnh |
1.12 |
|
515 |
|
|
checkpoint13 |
516 |
|
|
Release which corrects global_max problem and a couple |
517 |
|
|
of KGM time-averaging diagnostic errors. Also contains |
518 |
|
|
a double-gyre experiment setup as well as the baseline |
519 |
|
|
4 degree global template. The double gyre template is |
520 |
|
|
organised to allow it to be applied automatically to |
521 |
|
|
the baseline configuration. |
522 |
adcroft |
1.11 |
|
523 |
|
|
branch-point-rdot |
524 |
|
|
A few tidy-ups have been made bt the real point of this |
525 |
|
|
check-point (excuse the pun) is to allow a branch to be |
526 |
|
|
made for the purposes of adding the rDot alterations. |
527 |
|
|
I don't want to commit the rDot to the main-trunk until |
528 |
|
|
we've actually tested it... |
529 |
cnh |
1.10 |
|
530 |
|
|
checkpoint12 |
531 |
|
|
Tidy up and added generic genmake script (formerly |
532 |
|
|
configure script). |
533 |
|
|
Released to testers. |
534 |
adcroft |
1.9 |
|
535 |
|
|
checkpoint11 |
536 |
|
|
Re-arranged initialise() and introduced ini_vertical_grid() |
537 |
|
|
and ini_masks_etc(). |
538 |
adcroft |
1.8 |
|
539 |
|
|
checkpoint10 |
540 |
|
|
Introduced the configure script. |
541 |
|
|
Separated out the diags package. |
542 |
|
|
Added template for writing time-averages of tile/intermediate quantities. |
543 |
|
|
Updated SIZE.h in exp2 and made the data big-endian. |
544 |
adcroft |
1.7 |
|
545 |
|
|
checkpoint9 |
546 |
|
|
MPI fix. Filename changes (meta/data). salbin*y stuff. |
547 |
|
|
General tidy-up. |
548 |
|
|
SST.bin SSS.bin added to verification/exp2 |
549 |
adcroft |
1.6 |
|
550 |
|
|
checkpoint8 |
551 |
|
|
Inludes time-dependant forcing and time-averaging. |
552 |
|
|
Works at 4x4 and 2.8125x2.8125 global |
553 |
|
|
|
554 |
|
|
checkpoint7-4degree-ref |
555 |
|
|
Branch from checkpoint7. Released for application to |
556 |
|
|
global modeling and general modeling - process studies, regional |
557 |
|
|
model etc.. |
558 |
|
|
Configured for verification/exp2 - 4 degree global, two process. |
559 |
cnh |
1.5 |
|
560 |
|
|
checkpoint7 |
561 |
|
|
Created by cnh |
562 |
|
|
Simple 4 degree global simulation |
563 |
|
|
configuration. |
564 |
|
|
Includes climatological wind, |
565 |
|
|
hydrography, bathymetry etc |
566 |
|
|
Does not include Heat Flux and E-P |
567 |
cnh |
1.4 |
|
568 |
|
|
checkpoint6 |
569 |
|
|
Created by cnh |
570 |
|
|
merged checkpoint5 with CD and |
571 |
|
|
spherical polar code. |
572 |
|
|
Still some problems with GM Redi |
573 |
|
|
abd full topography. |
574 |
cnh |
1.3 |
|
575 |
|
|
checkpoint5 |
576 |
|
|
Created by AJA |
577 |
|
|
contains updates to GM Redi |
578 |
|
|
and reordered timestepping loop |
579 |
|
|
for Implicit Diffusion. |
580 |
cnh |
1.2 |
|
581 |
|
|
checkpoint4 |
582 |
|
|
Created by cnh |
583 |
|
|
Contains memory saving macros ( _rdxc etc..) for when |
584 |
|
|
grid variations are limited. |
585 |
|
|
Contains polynomial coeffs for EOS and knudsen program |
586 |
|
|
for generation. |
587 |
|
|
|
588 |
cnh |
1.1 |
checkpoint3 |
589 |
|
|
Created by cnh |
590 |
|
|
Added extra flags for runtime options |
591 |
|
|
Added this file |
592 |
|
|
Added implicit free-surface |
593 |
|
|
Added pre-conditioner |
594 |
|
|
Put compare01 into repository ( compare01/... ) |
595 |
|
|
Put data and eedata into repository ( verification/exp1 ) |
596 |
|
|
|
597 |
|
|
checkpoint2 |
598 |
|
|
Created by AJA |
599 |
|
|
Added GM/Redi |
600 |
|
|
|
601 |
|
|
checkpoint1 |
602 |
|
|
Created by AJA |
603 |
|
|
Restructured kloop in dynamics.F |
604 |
|
|
Added non-linear EOS |
605 |
|
|
|
606 |
cnh |
1.2 |
baseline |
607 |
|
|
Original checked in code |
608 |
cnh |
1.1 |
|