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Wed May 5 22:50:54 2004 UTC (20 years, 1 month ago) by dimitri
Branch: MAIN
CVS Tags: checkpoint64y, checkpoint64x, checkpoint58l_post, checkpoint64z, checkpoint57t_post, checkpoint64q, checkpoint64p, checkpoint64s, checkpoint64r, checkpoint64u, checkpoint64t, checkpoint64w, checkpoint64v, checkpoint64i, checkpoint64h, checkpoint64k, checkpoint64j, checkpoint64m, checkpoint64l, checkpoint64o, checkpoint64n, checkpoint64a, checkpoint57o_post, checkpoint64c, checkpoint64b, checkpoint64e, checkpoint64d, checkpoint64g, checkpoint64f, checkpoint58e_post, checkpoint57v_post, checkpoint52n_post, checkpoint53d_post, checkpoint58u_post, checkpoint58w_post, checkpoint54a_pre, checkpoint57m_post, checkpoint55c_post, checkpoint54e_post, checkpoint57s_post, checkpoint54a_post, checkpoint63p, checkpoint63q, checkpoint63r, checkpoint63s, checkpoint63l, checkpoint63m, checkpoint63n, checkpoint63o, checkpoint63h, checkpoint63i, checkpoint63j, checkpoint63k, checkpoint63d, checkpoint63e, checkpoint63f, checkpoint63g, checkpoint53c_post, checkpoint63a, checkpoint63b, checkpoint63c, checkpoint57k_post, checkpoint55d_pre, checkpoint57d_post, checkpoint57g_post, checkpoint64, checkpoint65, checkpoint60, checkpoint61, checkpoint62, checkpoint63, checkpoint57b_post, checkpoint57c_pre, checkpoint58r_post, checkpoint55j_post, checkpoint56b_post, checkpoint57i_post, checkpoint57y_post, checkpoint57e_post, checkpoint66g, checkpoint66f, checkpoint66e, checkpoint66d, checkpoint66c, checkpoint66b, checkpoint66a, checkpoint66o, checkpoint66n, checkpoint66m, checkpoint66l, checkpoint66k, checkpoint66j, checkpoint66i, checkpoint66h, checkpoint55h_post, checkpoint58n_post, checkpoint58x_post, checkpoint57g_pre, checkpoint54b_post, checkpoint53b_pre, checkpoint55b_post, checkpoint58t_post, checkpoint58h_post, checkpoint65z, checkpoint65x, checkpoint65y, checkpoint54d_post, checkpoint65r, checkpoint65s, checkpoint65p, checkpoint65q, checkpoint65v, checkpoint65w, checkpoint65t, checkpoint65u, checkpoint65j, checkpoint65k, checkpoint65h, checkpoint65i, checkpoint65n, checkpoint65o, checkpoint65l, checkpoint65m, checkpoint65b, checkpoint65c, checkpoint65a, checkpoint65f, checkpoint65g, checkpoint65d, checkpoint65e, checkpoint56c_post, checkpoint57y_pre, checkpoint55, checkpoint53a_post, checkpoint57f_pre, checkpoint57a_post, checkpoint54, checkpoint58q_post, checkpoint54f_post, checkpoint53b_post, checkpoint59q, checkpoint59p, checkpoint55g_post, checkpoint59r, checkpoint58j_post, checkpoint59e, checkpoint59d, checkpoint59g, checkpoint59f, checkpoint59a, checkpoint55f_post, checkpoint59c, checkpoint59b, checkpoint59m, checkpoint59l, checkpoint59o, checkpoint59n, checkpoint59i, checkpoint59h, checkpoint59k, checkpoint59j, checkpoint57r_post, checkpoint59, checkpoint58, checkpoint57a_pre, checkpoint55i_post, checkpoint57, checkpoint56, checkpoint53, eckpoint57e_pre, checkpoint57h_done, checkpoint58f_post, checkpoint53g_post, checkpoint57x_post, checkpoint57n_post, checkpoint58d_post, checkpoint58c_post, checkpoint57w_post, checkpoint57p_post, checkpint57u_post, checkpoint57f_post, checkpoint58a_post, checkpoint58i_post, checkpoint57q_post, checkpoint58g_post, checkpoint58o_post, checkpoint57z_post, checkpoint62c, checkpoint62b, checkpoint62a, checkpoint62g, checkpoint62f, checkpoint62e, checkpoint62d, checkpoint62k, checkpoint62j, checkpoint62i, checkpoint62h, checkpoint62o, checkpoint62n, checkpoint62m, checkpoint62l, checkpoint62s, checkpoint62r, checkpoint62q, checkpoint62p, checkpoint62w, checkpoint62v, checkpoint62u, checkpoint62t, checkpoint57c_post, checkpoint62z, checkpoint62y, checkpoint62x, checkpoint58y_post, checkpoint55e_post, checkpoint58k_post, checkpoint58v_post, checkpoint53f_post, checkpoint55a_post, checkpoint53d_pre, checkpoint54c_post, checkpoint58s_post, checkpoint61f, checkpoint61g, checkpoint61d, checkpoint61e, checkpoint61b, checkpoint61c, checkpoint58p_post, checkpoint61a, checkpoint61n, checkpoint61o, checkpoint61l, checkpoint61m, checkpoint61j, checkpoint61k, checkpoint61h, checkpoint61i, checkpoint61v, checkpoint61w, checkpoint61t, checkpoint61u, checkpoint61r, checkpoint61s, checkpoint61p, checkpoint61q, checkpoint57j_post, checkpoint61z, checkpoint61x, checkpoint61y, checkpoint58b_post, checkpoint57h_pre, checkpoint58m_post, checkpoint57l_post, checkpoint57h_post, checkpoint56a_post, checkpoint55d_post, HEAD
Preliminary Api Reference documentation for pkg/kpp, sbo, and seaice

1 dimitri 1.1 @STRING{acm = "ACM Trans.\ on Math. Software"}
2     @STRING{adg = "Adv.\ Geophys."}
3     @STRING{agu = "Eos Trans.\ AGU"}
4     @STRING{aiaaj= "AIAA J."}
5     @STRING{ao = "Appl.\ Opt."} * Applied Optics
6     @STRING{bams = "Bull.\ Amer.\ Meteor.\ Soc."}
7     @STRING{dao = "Dyn.\ Atmos.\ \& Oceans"} * Dynamics of Atmospheres and Oceans
8     @STRING{dsr = "Deep Sea Res."} * Deep-Sea Research
9     @STRING{gbc = "Global Biogeochem. Cycles"}
10     @STRING{gfd = "Geophys.\ Fluid Dyn."} * Geophysical Fluid Dynamics
11     @STRING{gji = "Geophys.\ J. Int."}
12     @string{grl = "Geophys.\ Res.\ Let."}
13     @STRING{ip = "Inverse Problems"}
14     @STRING{ijrs = "Int.\ J. Remote Sens."} International Journal of Remote Sensing
15     @STRING{jam = "J. Appl.\ Meteor."} * Journal of Applied Meteorology
16     @STRING{jas = "J. Atmos.\ Sci."}
17     @STRING{jasa = "J. Acoust.\ Soc.\ Am."}
18     @STRING{jbe = "J. Basic Eng."}
19     @STRING{jclim= "J. Clim."}
20     @STRING{jcp = "J. Comput.\ Phys."}
21     @STRING{jfm = "J. Fluid Mech."} * Journal of Fluid Mechanics
22     @STRING{jfp = "J. Func.\ Programming"}
23     @STRING{jgr = "J. Geophys.\ Res."} * Journal of Geophysical Research
24     @STRING{joe = "IEEE J. Oceanic Eng."} * IEEE Journal of Oceanic Engineering
25     @STRING{joc = "J. Oceanogr."}
26     @STRING{josa = "J. Opt.\ Soc.\ Am."}
27     @STRING{jmr = "J. Mar.\ Res."} * Journal of Marine Research
28     @STRING{jms = "J. Mar.\ Sys."} * Journal of Marine Systems
29     @STRING{jmsj = "J. Meteor.\ Soc.\ Japan"}
30     @STRING{jpo = "J. Phys.\ Oceanogr."} * Journal of Physical Oceanography
31     @STRING{jtech= "J. Atmos.\ Oceanic Technol."}
32     @STRING{mwr = "Mon.\ Weather Rev."}
33     @STRING{om = "Ocean Modeling"}
34     @STRING{pad = "Physica D"}
35     @STRING{pf = "Phys.\ Fluids"} * The Physics of Fluids
36     @STRING{ph = "Physics"}
37     @STRING{pi = "Proc.\ IEEE"} * Proceedings of the IEEE
38     @STRING{pr = "Polar Rec."}
39     @STRING{prs = "Proc.\ Roy.\ Soc."} * Proceed. of the Royal Society of London
40     @STRING{prog = "Prog.\ Oceanogr."}
41     @STRING{ptrs = "Phil.\ Trans.\ R.\ Soc.\ Lond."}
42     @STRING{qam = "Quart.\ Appl.\ Math."} * Quarterly of Applied Mathematics
43     @STRING{qjrms= "Q.\ J.\ R.\ Meteorol.\ Soc."}
44     @STRING{rgsp = "Rev.\ Geophys.\ and Space Phys."}
45     @STRING{rog = "Rev.\ Geophysics"} * Reviews of Geophysics
46     @STRING{rs = "Radio Sci."} * Radio Science
47     @STRING{tac = "IEEE Trans.\ Autom. Control"}
48     @STRING{tass = "IEEE Trans.\ Acoust.\ Speech Signal Process."}
49     @STRING{tct = "IEEE Trans.\ Commun.\ Technol."}
50     @STRING{tgrs = "IEEE Trans.\ Geosci.\ Remote Sens."}
51     @STRING{tip = "IEEE Trans.\ Image Processing"}
52     @STRING{tsp = "IEEE Trans.\ Signal Processing"}
53     @STRING{wrm = "Waves Random Media"}
54    
55     @ARTICLE{adc97,
56     AUTHOR = "Alistair Adcroft and Chris Hill and John Marshall",
57     TITLE = "The Representation of Topography by Shaved
58     Cells in a Height Coordinate Model",
59     JOURNAL = mwr,
60     YEAR = 1997,
61     VOLUME = 125,
62     NUMBER = 9,
63     PAGES = "2293-2315"}
64    
65     @ARTICLE{adc04,
66     AUTHOR = "Alistair Adcroft and Jean-Michel Campin and Chris Hill
67     and John C. Marshall",
68     TITLE = "Implementation of an Atmosphere-Ocean General Circulation
69     Model on the Expanded Spherical Cube",
70     JOURNAL = mwr,
71     YEAR = "submitted, available at
72     {http://mitgcm.org/\~{\ }adcroft/papers/adcroft\_et\_al\_MWR\_2004.pdf}"}
73    
74     @ARTICLE{arv96,
75     AUTHOR = "Arvind and Cho and C. Hill and J. Marshall",
76     TITLE = "A Comparison of Implicitly Parallel Multi-Threaded and
77     Data-Parallel Implementations of an Ocean Model Based on the
78     {Navier Stokes} Equations",
79     JOURNAL = jfp,
80     YEAR = "submitted 1996"}
81    
82     @INPROCEEDINGS{cam03,
83     AUTHOR = "J.-M. Campin and A. Adcroft and C. Hill and J. Marshall",
84     TITLE = "A Coupled Ocean-Atmosphere {GCM} Using a Single Hydrodynamical Kernel",
85     YEAR = 2003,
86     MONTH = "September 15-19,",
87     PAGES = "45",
88     PUBLISHER = "Max-Planck-Institute for Meteorology",
89     BOOKTITLE = "International Conference on Earth System Modelling",
90     ADRESS = "Hamburg"}
91    
92     @TECHREPORT{ecc99,
93     AUTHOR = "D. Stammer and R. Davis and L.-L. Fu and I. Fukumori and R. Giering
94     and T. Lee and J. Marotzke and J. Marshall and D. Menemenlis and
95     P. Niiler and C. Wunsch and V. Zlotnicki",
96     TITLE = "The Consortium for Estimating the Circulation and Climate
97     of the Ocean (ECCO): Science Goals and Task Plan",
98     INSTITUTION = "Scripps Instituttion of Oceanography",
99     YEAR = 1999,
100     TYPE = "The ECCO Report Series",
101     NUMBER = 1,
102     ADDRESS = "9500 Gilman Dr., La Jolla, CA 92093-0239; also available at
103     http://www.ecco.ucsd.edu/report/report\_1/report\_1.html"}
104    
105     @ARTICLE{fla92,
106     AUTHOR = "G. M. Flato and W. D. {Hibler, III}",
107     TITLE = "Modeling pack ice as a cavitating fluid",
108     JOURNAL = jpo,
109     YEAR = 1992,
110     VOLUME = 22,
111     PAGES = "626-651"}
112    
113     @INCOLLECTION{hei02,
114     AUTHOR = "P. Heimbach and C. Hill and R. Giering",
115     TITLE = "Automatic Generation of Efficient Adjoint Code for a
116     Parallel Navier-Stokes Solver",
117     BOOKTITLE = "Lecture Notes in Computer Science",
118     PUBLISHER = "Springer-Verlag",
119     YEAR = 2002,
120     EDITOR = "J. J. Dongarra and P. M. A. Sloot and C. J. K. Tan",
121     PAGES = "1019-1028",
122     ADDRESS = "New York"}
123    
124     @ARTICLE{hib79,
125     AUTHOR = "W. D. {Hibler, III}",
126     TITLE = "A Dynamic Thermodynamic Sea Ice Model",
127     JOURNAL = jpo,
128     YEAR = 1979,
129     VOLUME = 9,
130     PAGES = "815-846"}
131    
132     @ARTICLE{hib80,
133     AUTHOR = "W. D. {Hibler, III}",
134     TITLE = "Modeling a Variable Thickness Sea Ice Cover",
135     JOURNAL = mwr,
136     YEAR = 1980,
137     VOLUME = 1,
138     PAGES = "1943-1973"}
139    
140     @INPROCEEDINGS{hil95,
141     AUTHOR = "C. Hill and J. Marshall",
142     TITLE = "Application of a Parallel {Navier-Stokes} Model to Ocean
143     Circulation",
144     BOOKTITLE = "Proceedings of Parallel CFD '95",
145     YEAR = 1995,
146     PUBLISHER = "Caltech"}
147    
148     @ARTICLE{hun97,
149     AUTHOR = "E. C. Hunke and J. K. Dukowicz",
150     TITLE = "An elastic-viscous-plastic model for sea ice dynamics",
151     JOURNAL = jpo,
152     YEAR = 1997,
153     VOLUME = 27,
154     PAGES = "1849-1867"}
155    
156     @ARTICLE{lar94,
157     AUTHOR = "W. G. Large and J. C. McWilliams and S.C. Doney",
158     TITLE = "Oceanic vertical mixing: A review and a model with a nonlocal
159     boundary layer parameterization",
160     JOURNAL = rog,
161     YEAR = 1994,
162     VOLUME = 32,
163     PAGES = "363"}
164    
165     @ARTICLE{mar97a,
166     AUTHOR = "John Marshall and Alistair Adcroft and Chris Hill and
167     Lev Perelman and Curtis Heisey",
168     TITLE = "A Finite-Volume, Incompressible {Navier-Stokes} Model for
169     Studies of the Ocean on Parallel Computers",
170     JOURNAL = jgr,
171     YEAR = 1997,
172     VOLUME = 102,
173     NUMBER = "C3",
174     PAGES = "5753-5766",
175     MONTH = "March 15,"}
176    
177     @ARTICLE{mar97b,
178     AUTHOR = "John Marshall and Chris Hill and Lev Perelman and
179     Alistair Adcroft",
180     TITLE = "Hydrostatic, Quasi-Hydrostatic and Non-Hydrostatic Ocean
181     Modeling",
182     JOURNAL = jgr,
183     YEAR = 1997,
184     VOLUME = 102,
185     NUMBER = "C3",
186     PAGES = "5733-5752",
187     MONTH = "March 15,"}
188    
189     @ARTICLE{mck03,
190     AUTHOR = "Galen A. McKinley and Michael J. Follows and John Marshall",
191     TITLE = "Interannual Variability of Air-Sea O$_2$ Fluxes and the Determination
192     of CO$_2$ Sinks Using Atmospheric O$_2$/N$_2$",
193     JOURNAL = grl,
194     YEAR = 2003,
195     VOLUME = 30,
196     NUMBER = 3,
197     PAGES = 1101}
198    
199     @TECHREPORT{men94a,
200     AUTHOR = "Dimitris Menemenlis and Carl Wunsch",
201     TITLE = "Ocean-Climate Estimation Using {ATOC}",
202     INSTITUTION = "{ATOC} Occasional Notes",
203     YEAR = 1994,
204     NUMBER = 23,
205     MONTH = dec}
206    
207     @TECHREPORT{men95c,
208     AUTHOR = "Dimitris Menemenlis and Carl Wunsch",
209     TITLE = "Recent North Pacific Climatology for {ATOC}",
210     INSTITUTION = "{ATOC} Occasional Notes",
211     YEAR = 1995,
212     NUMBER = 30,
213     MONTH = mar}
214    
215     @ARTICLE{men97,
216     AUTHOR = "Dimitris Menemenlis and Carl Wunsch",
217     TITLE = "Linearization of an Oceanic Circulation Model for Data
218     Assimilation and Climate Studies",
219     JOURNAL = jtech,
220     YEAR = 1997,
221     VOLUME = 14,
222     NUMBER = 6,
223     PAGES = "1420-1443"}
224    
225     @ARTICLE{men97a,
226     AUTHOR = "Dimitris Menemenlis and Tony Webb and Carl Wunsch and Uwe
227     Send and Chris Hill",
228     TITLE = "Basin-Scale Ocean Circulation from Combined Altimetric,
229     Tomographic and Model Data",
230     JOURNAL = "Nature",
231     YEAR = 1997,
232     VOLUME = 385,
233     PAGES = "618-621"}
234    
235     @ARTICLE{men97b,
236     AUTHOR = "D. Menemenlis and D. Stammer and C. Wunsch and B. D.
237     Dushaw and {the ATOC group}",
238     TITLE = "Preliminary Estimates of north {Pacific} Circulation from
239     Combined Altimetry, Acoustic Tomography, and a General
240     Circulation Model",
241     JOURNAL = "International WOCE Newsletter",
242     YEAR = 1997,
243     NUMBER = 25,
244     PAGES = "7-10",
245     MONTH = feb}
246    
247     @ARTICLE{men00,
248     AUTHOR = "Dimitris Menemenlis and Michael Chechelnitsky",
249     TITLE = "Error Estimates for an Ocean General Circulation Model
250     From Altimeter and Acoustic Tomography Data",
251     JOURNAL = mwr,
252     YEAR = 2000,
253     VOLUME = 128,
254     PAGES = "763--778"}
255    
256     @ARTICLE{men03,
257     AUTHOR = "D. Menemenlis and B. Cheng and I. Fukumori and T. Lee and
258     A. Koehl and D. Stammer and A. Adcroft and P. Heimbach and
259     C. Hill and J. Zhang and C. Henze and J. Taft",
260     TITLE = "The {ECCO} High-Resolution Global-Ocean State Estimation Initiative",
261     JOURNAL = agu,
262     YEAR = 2003,
263     VOLUME = 84,
264     NUMBER = 52,
265     PAGES = "OS21H-02",
266     NOTE = "Available at http://ecco.jpl.nasa.gov/cube\_sphere/"}
267    
268     @ARTICLE{sem76,
269     AUTHOR = "Semtner, Jr., Albert J.",
270     TITLE = "A model for the thermodynamic growth of sea ice in
271     numerical investigations of climate",
272     JOURNAL = jpo,
273     YEAR = 1976,
274     VOLUME = 6,
275     PAGES = "379-389"}
276    
277     @TECHREPORT{sta93,
278     AUTHOR = "Detlef Stammer and Carl Wunsch",
279     TITLE = "Large Scale Modeling in the {ATOC} Context",
280     INSTITUTION = "{ATOC} Occasional Notes",
281     YEAR = 1993,
282     NUMBER = "14",
283     MONTH = sep}
284    
285     @ARTICLE{sta94,
286     AUTHOR = "Detlef Stammer and Carl Wunsch",
287     TITLE = "Preliminary Assessment of the Accuracy and Precision of
288     {TOPEX/POSEIDON} Altimeter Data With Respect to the
289     Large-Scale Ocean Circulation",
290     JOURNAL = jgr,
291     YEAR = 1994,
292     VOLUME = 99,
293     NUMBER = "C12",
294     PAGES = "24,584-24,604",
295     MONTH = "December 15,"}
296    
297     @ARTICLE{sta96,
298     AUTHOR = "Detlef Stammer and Carl Wunsch",
299     TITLE = "The Determination of the the Large-Scale Circulation of the
300     {Pacific Ocean} from Satellite Altimetry Using Model
301     {Green's} Functions",
302     JOURNAL = jgr,
303     YEAR = 1996,
304     VOLUME = 101,
305     NUMBER = "C8",
306     PAGES = "18,409-18,432",
307     MONTH = "August 15,"}
308    
309     @ARTICLE{sta96b,
310     AUTHOR = "Detlef Stammer and Robin Tokmakian and Albert Semtner and
311     Carl Wunsch",
312     TITLE = "How Well Does a 1/4$^\circ$ Global Circulation Model
313     Simulate Large-Scale Oceanic Observations?",
314     JOURNAL = jgr,
315     YEAR = 1996,
316     VOLUME = 101,
317     NUMBER = "C11",
318     PAGES = "25,779-25,811"}
319    
320     @ARTICLE{sta00,
321     AUTHOR = "D. Stammer and C. Wunsch and R. M. Ponte",
322     TITLE = "De-Aliasing of Global High Frequency Barotropic
323     Motions in Altimeter Observations",
324     JOURNAL = grl,
325     VOLUME = "27",
326     PAGES = "1175-1178",
327     YEAR = "2000"}
328    
329     @ARTICLE{sta03,
330     AUTHOR = "D. Stammer and C. Wunsch and R. Giering and C. Eckert and
331     P. Heimbach and J. Marotzke and A. Adcroft and C. N. Hill
332     and J. Marshall",
333     TITLE = "Volume, Heat, and Freshwater Transports of the Global Ocean
334     Circulation 1993-2000, Estimated From a General Circulation Model
335     Constrained by {World Ocean Circulation Experiment (WOCE)} Data",
336     JOURNAL = jgr,
337     YEAR = 2003,
338     VOLUME = 108,
339     NUMBER = "C1",
340     PAGES = "3007-3029"}
341    
342     @ARTICLE{win00,
343     AUTHOR = "M. Winton",
344     TITLE = "A reformulated three-layer sea ice model",
345     JOURNAL = jtech,
346     YEAR = 2000,
347     VOLUME = 17,
348     PAGES = "525-531"}
349    
350     @ARTICLE{zha97,
351     AUTHOR = "Jinlun Zhang and W. D. {Hibler, III}",
352     TITLE = "On an Efficient Numerical Method for Modeling
353     Sea Ice Dynamics",
354     JOURNAL = jgr,
355     YEAR = 1997,
356     VOLUME = 102,
357     PAGES = "8691-8702"}
358    
359     @ARTICLE{zha98a,
360     AUTHOR = "J. Zhang and W. D. {Hibler, III} and M. Steele
361     and D. A. Rothrock",
362     TITLE = "Arctic ice-ocean modeling with and without climate restoring",
363     JOURNAL = jpo,
364     YEAR = 1998,
365     VOLUME = 28,
366     PAGES = "191-217"}
367    
368     @ARTICLE{zha98b,
369     AUTHOR = "J. Zhang and D. A. Rothrock and M. Steele",
370     TITLE = "Warming of the {Arctic Ocean} by a strengthened {Atlantic}
371     inflow: Model results",
372     JOURNAL = grl,
373     YEAR = 1998,
374     VOLUME = 25,
375     PAGES = "1745-1748"}
376    
377     @ARTICLE{zha00,
378     AUTHOR = "Jinlun Zhang and Drew Rothrock",
379     TITLE = "Modeling Arctic Sea Ice with an Efficient Plastic Solution",
380     JOURNAL = jgr,
381     YEAR = 2000,
382     VOLUME = 105,
383     PAGES = "3325-3338"}
384    
385     @ARTICLE{zha00a,
386     AUTHOR = "J. Zhang and D. A. Rothrock and M. Steele",
387     TITLE = "Recent changes in {Arctic} sea ice: The interplay
388     between ice dynamics and thermodynamics",
389     JOURNAL = jclim,
390     YEAR = 2000,
391     VOLUME = 13,
392     PAGES = "3099-3114"}
393    
394     @ARTICLE{zha00b,
395     AUTHOR = "J. Zhang and D. A. Rothrock",
396     TITLE = "A thickness and enthalpy distribution sea-ice model",
397     JOURNAL = jpo,
398     YEAR = "in press, 2000"}

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