| 1 |
SHELL = /bin/tcsh |
| 2 |
RM = rm -f |
| 3 |
LOC = $(PWD) |
| 4 |
TAMC = tamc |
| 5 |
###TAMC = /data43/ralf/tamc/tamc |
| 6 |
TAF = taf |
| 7 |
###TAF = ~fastopt/bin/taf |
| 8 |
DEST = . |
| 9 |
SOURCE_CODE = ../bin |
| 10 |
ADJOINT_SCRIPT = ../adjoint |
| 11 |
BASE = .. |
| 12 |
PKG = $(BASE)/pkg |
| 13 |
# |
| 14 |
ADTAMCFLAGS = -reverse -admark ad -i4 -r4 |
| 15 |
ADTAFFLAGS = -reverse -admark ad -i4 -r4 \ |
| 16 |
-flow taf_flow.log -nonew_arg |
| 17 |
FTLTAMCFLAGS = -forward -ftlmark g_ -i4 -r4 |
| 18 |
FTLTAFFLAGS = -forward -ftlmark g_ -i4 -r4 \ |
| 19 |
-flow taf_flow.log -nonew_arg |
| 20 |
SVDTAMCFLAGS = -reverse -forward -pure -i4 -r4 |
| 21 |
SVDTAFFLAGS = -reverse -forward -pure -i4 -r4 \ |
| 22 |
-flow taf_flow.log -nonew_arg |
| 23 |
# |
| 24 |
# -warn_step -flow taf_flow.log |
| 25 |
|
| 26 |
DIFF_FLAGS = -toplevel the_main_loop \ |
| 27 |
-input ' xx_theta_dummy \ |
| 28 |
xx_salt_dummy \ |
| 29 |
xx_tr1_dummy \ |
| 30 |
xx_hflux_dummy \ |
| 31 |
xx_sflux_dummy \ |
| 32 |
xx_tauu_dummy \ |
| 33 |
xx_tauv_dummy \ |
| 34 |
xx_sst_dummy \ |
| 35 |
xx_sss_dummy \ |
| 36 |
xx_diffkr_dummy \ |
| 37 |
xx_kapgm_dummy \ |
| 38 |
xx_efluxy_dummy \ |
| 39 |
xx_efluxp_dummy' \ |
| 40 |
-output 'fc' |
| 41 |
# |
| 42 |
# -output 'objf_vector' |
| 43 |
# -output 'fc' |
| 44 |
|
| 45 |
ADTAMCFLAG = $(ADTAMCFLAGS) $(DIFF_FLAGS) |
| 46 |
ADTAFFLAG = $(ADTAFFLAGS) $(DIFF_FLAGS) |
| 47 |
|
| 48 |
FTLTAMCFLAG = $(FTLTAMCFLAGS) $(DIFF_FLAGS) |
| 49 |
FTLTAFFLAG = $(FTLTAFFLAGS) $(DIFF_FLAGS) |
| 50 |
|
| 51 |
SVDTAMCFLAG = $(SVDTAMCFLAGS) $(DIFF_FLAGS) |
| 52 |
SVDTAFFLAG = $(SVDTAFFLAGS) $(DIFF_FLAGS) |
| 53 |
|
| 54 |
# Source files for the MITgcmUV |
| 55 |
SRC_MODEL = \ |
| 56 |
$(PKG)/autodiff/read_write.flow \ |
| 57 |
$(PKG)/autodiff/read_write_fld.flow \ |
| 58 |
$(PKG)/autodiff/read_write_rec.flow \ |
| 59 |
$(PKG)/autodiff/diags.flow \ |
| 60 |
$(PKG)/autodiff/cg2d.flow \ |
| 61 |
$(PKG)/autodiff/debug.flow \ |
| 62 |
$(PKG)/autodiff/do_the_model_io.flow \ |
| 63 |
$(PKG)/autodiff/dummy_in_stepping.flow \ |
| 64 |
$(PKG)/autodiff/external_fields_load.flow \ |
| 65 |
$(PKG)/autodiff/eesupp.flow \ |
| 66 |
$(PKG)/autodiff/active_file.flow \ |
| 67 |
$(PKG)/autodiff/write_state.flow \ |
| 68 |
$(PKG)/autodiff/ecco_check_exp.flow \ |
| 69 |
$(PKG)/autodiff/exch_ad.flow \ |
| 70 |
$(PKG)/autodiff/exch_z_ad.flow \ |
| 71 |
$(PKG)/autodiff/exch_uv_ad.flow \ |
| 72 |
$(PKG)/autodiff/global_sum_ad.flow \ |
| 73 |
$(PKG)/autodiff/global_max_ad.flow \ |
| 74 |
$(PKG)/autodiff/initialisation.flow \ |
| 75 |
$(PKG)/autodiff/mdsio.flow \ |
| 76 |
$(PKG)/autodiff/monitor.flow \ |
| 77 |
$(PKG)/autodiff/checkpoint.flow \ |
| 78 |
$(PKG)/autodiff/print_message.flow \ |
| 79 |
$(PKG)/autodiff/open_copy_data_file.flow\ |
| 80 |
$(PKG)/autodiff/timeave.flow \ |
| 81 |
\ |
| 82 |
$(SOURCE_CODE)/adams_bashforth2.f \ |
| 83 |
$(SOURCE_CODE)/calc_buoyancy.f \ |
| 84 |
$(SOURCE_CODE)/calc_common_factors.f \ |
| 85 |
$(SOURCE_CODE)/calc_diffusivity.f \ |
| 86 |
$(SOURCE_CODE)/calc_div_ghat.f \ |
| 87 |
$(SOURCE_CODE)/calc_exact_eta.f \ |
| 88 |
$(SOURCE_CODE)/calc_grad_phi_surf.f \ |
| 89 |
$(SOURCE_CODE)/calc_gs.f \ |
| 90 |
$(SOURCE_CODE)/calc_gt.f \ |
| 91 |
$(SOURCE_CODE)/calc_gtr1.f \ |
| 92 |
$(SOURCE_CODE)/calc_ivdc.f \ |
| 93 |
$(SOURCE_CODE)/calc_phi_hyd.f \ |
| 94 |
$(SOURCE_CODE)/calc_viscosity.f \ |
| 95 |
$(SOURCE_CODE)/comm_stats.f \ |
| 96 |
$(SOURCE_CODE)/convect.f \ |
| 97 |
$(SOURCE_CODE)/convective_adjustment.f \ |
| 98 |
$(SOURCE_CODE)/convective_adjustment_ini.f \ |
| 99 |
$(SOURCE_CODE)/convective_weights.f \ |
| 100 |
$(SOURCE_CODE)/convectively_mixtracer.f \ |
| 101 |
$(SOURCE_CODE)/correction_step.f \ |
| 102 |
$(SOURCE_CODE)/cycle_tracer.f \ |
| 103 |
$(SOURCE_CODE)/different_multiple.f \ |
| 104 |
$(SOURCE_CODE)/do_fields_blocking_exchanges.f \ |
| 105 |
$(SOURCE_CODE)/do_the_model_io.f \ |
| 106 |
$(SOURCE_CODE)/dynamics.f \ |
| 107 |
$(SOURCE_CODE)/external_forcing.f \ |
| 108 |
$(SOURCE_CODE)/external_forcing_surf.f \ |
| 109 |
$(SOURCE_CODE)/find_alpha.f \ |
| 110 |
$(SOURCE_CODE)/find_rho.f \ |
| 111 |
$(SOURCE_CODE)/forward_step.f \ |
| 112 |
$(SOURCE_CODE)/freeze.f \ |
| 113 |
\ |
| 114 |
$(SOURCE_CODE)/gad_advection.f \ |
| 115 |
$(SOURCE_CODE)/gad_biharm_x.f \ |
| 116 |
$(SOURCE_CODE)/gad_biharm_y.f \ |
| 117 |
$(SOURCE_CODE)/gad_c2_adv_r.f \ |
| 118 |
$(SOURCE_CODE)/gad_c2_adv_x.f \ |
| 119 |
$(SOURCE_CODE)/gad_c2_adv_y.f \ |
| 120 |
$(SOURCE_CODE)/gad_c4_adv_r.f \ |
| 121 |
$(SOURCE_CODE)/gad_c4_adv_x.f \ |
| 122 |
$(SOURCE_CODE)/gad_c4_adv_y.f \ |
| 123 |
$(SOURCE_CODE)/gad_calc_rhs.f \ |
| 124 |
$(SOURCE_CODE)/gad_del2.f \ |
| 125 |
$(SOURCE_CODE)/gad_diff_r.f \ |
| 126 |
$(SOURCE_CODE)/gad_diff_x.f \ |
| 127 |
$(SOURCE_CODE)/gad_diff_y.f \ |
| 128 |
$(SOURCE_CODE)/gad_dst3_adv_x.f \ |
| 129 |
$(SOURCE_CODE)/gad_dst3_adv_y.f \ |
| 130 |
$(SOURCE_CODE)/gad_dst3_adv_r.f \ |
| 131 |
$(SOURCE_CODE)/gad_dst3fl_adv_x.f \ |
| 132 |
$(SOURCE_CODE)/gad_dst3fl_adv_y.f \ |
| 133 |
$(SOURCE_CODE)/gad_dst3fl_adv_r.f \ |
| 134 |
$(SOURCE_CODE)/gad_fluxlimit_adv_r.f \ |
| 135 |
$(SOURCE_CODE)/gad_fluxlimit_adv_x.f \ |
| 136 |
$(SOURCE_CODE)/gad_fluxlimit_adv_y.f \ |
| 137 |
$(SOURCE_CODE)/gad_grad_x.f \ |
| 138 |
$(SOURCE_CODE)/gad_grad_y.f \ |
| 139 |
$(SOURCE_CODE)/gad_u3_adv_r.f \ |
| 140 |
$(SOURCE_CODE)/gad_u3_adv_x.f \ |
| 141 |
$(SOURCE_CODE)/gad_u3_adv_y.f \ |
| 142 |
\ |
| 143 |
$(SOURCE_CODE)/grad_sigma.f \ |
| 144 |
$(SOURCE_CODE)/impldiff.f \ |
| 145 |
$(SOURCE_CODE)/ini_autodiff.f \ |
| 146 |
$(SOURCE_CODE)/ini_cartesian_grid.f \ |
| 147 |
$(SOURCE_CODE)/ini_cg2d.f \ |
| 148 |
$(SOURCE_CODE)/ini_communication_patterns.f \ |
| 149 |
$(SOURCE_CODE)/ini_cori.f \ |
| 150 |
$(SOURCE_CODE)/ini_curvilinear_grid.f \ |
| 151 |
$(SOURCE_CODE)/ini_depths.f \ |
| 152 |
$(SOURCE_CODE)/ini_fields.f \ |
| 153 |
$(SOURCE_CODE)/ini_forcing.f \ |
| 154 |
$(SOURCE_CODE)/ini_grid.f \ |
| 155 |
$(SOURCE_CODE)/ini_linear_phisurf.f \ |
| 156 |
$(SOURCE_CODE)/ini_masks_etc.f \ |
| 157 |
$(SOURCE_CODE)/ini_mixing.f \ |
| 158 |
$(SOURCE_CODE)/ini_p_ground.f \ |
| 159 |
$(SOURCE_CODE)/ini_pnh.f \ |
| 160 |
$(SOURCE_CODE)/ini_psurf.f \ |
| 161 |
$(SOURCE_CODE)/ini_salt.f \ |
| 162 |
$(SOURCE_CODE)/ini_spherical_polar_grid.f \ |
| 163 |
$(SOURCE_CODE)/ini_theta.f \ |
| 164 |
$(SOURCE_CODE)/ini_tr1.f \ |
| 165 |
$(SOURCE_CODE)/ini_dynvars.f \ |
| 166 |
$(SOURCE_CODE)/ini_vel.f \ |
| 167 |
$(SOURCE_CODE)/ini_vertical_grid.f \ |
| 168 |
$(SOURCE_CODE)/initialise_varia.f \ |
| 169 |
$(SOURCE_CODE)/integrate_for_w.f \ |
| 170 |
$(SOURCE_CODE)/modeldata_example.f \ |
| 171 |
\ |
| 172 |
$(SOURCE_CODE)/mom_fluxform.f \ |
| 173 |
$(SOURCE_CODE)/mom_hdissip.f \ |
| 174 |
$(SOURCE_CODE)/mom_vecinv.f \ |
| 175 |
$(SOURCE_CODE)/mom_calc_hfacz.f \ |
| 176 |
$(SOURCE_CODE)/mom_calc_ke.f \ |
| 177 |
$(SOURCE_CODE)/mom_calc_strain.f \ |
| 178 |
$(SOURCE_CODE)/mom_calc_tension.f \ |
| 179 |
$(SOURCE_CODE)/mom_cdscheme.f \ |
| 180 |
$(SOURCE_CODE)/mom_u_adv_uu.f \ |
| 181 |
$(SOURCE_CODE)/mom_u_adv_vu.f \ |
| 182 |
$(SOURCE_CODE)/mom_u_adv_wu.f \ |
| 183 |
$(SOURCE_CODE)/mom_u_bottomdrag.f \ |
| 184 |
$(SOURCE_CODE)/mom_u_coriolis.f \ |
| 185 |
$(SOURCE_CODE)/mom_u_del2u.f \ |
| 186 |
$(SOURCE_CODE)/mom_u_metric_nh.f \ |
| 187 |
$(SOURCE_CODE)/mom_u_metric_sphere.f \ |
| 188 |
$(SOURCE_CODE)/mom_u_rviscflux.f \ |
| 189 |
$(SOURCE_CODE)/mom_u_sidedrag.f \ |
| 190 |
$(SOURCE_CODE)/mom_u_xviscflux.f \ |
| 191 |
$(SOURCE_CODE)/mom_u_yviscflux.f \ |
| 192 |
$(SOURCE_CODE)/mom_v_adv_uv.f \ |
| 193 |
$(SOURCE_CODE)/mom_v_adv_vv.f \ |
| 194 |
$(SOURCE_CODE)/mom_v_adv_wv.f \ |
| 195 |
$(SOURCE_CODE)/mom_v_bottomdrag.f \ |
| 196 |
$(SOURCE_CODE)/mom_v_coriolis.f \ |
| 197 |
$(SOURCE_CODE)/mom_v_del2v.f \ |
| 198 |
$(SOURCE_CODE)/mom_v_metric_nh.f \ |
| 199 |
$(SOURCE_CODE)/mom_v_metric_sphere.f \ |
| 200 |
$(SOURCE_CODE)/mom_v_rviscflux.f \ |
| 201 |
$(SOURCE_CODE)/mom_v_sidedrag.f \ |
| 202 |
$(SOURCE_CODE)/mom_v_xviscflux.f \ |
| 203 |
$(SOURCE_CODE)/mom_v_yviscflux.f \ |
| 204 |
$(SOURCE_CODE)/mom_vi_calc_absvort3.f \ |
| 205 |
$(SOURCE_CODE)/mom_vi_calc_hdiv.f \ |
| 206 |
$(SOURCE_CODE)/mom_vi_calc_ke.f \ |
| 207 |
$(SOURCE_CODE)/mom_vi_calc_relvort3.f \ |
| 208 |
$(SOURCE_CODE)/mom_vi_coriolis.f \ |
| 209 |
$(SOURCE_CODE)/mom_vi_del2uv.f \ |
| 210 |
$(SOURCE_CODE)/mom_vi_hdissip.f \ |
| 211 |
$(SOURCE_CODE)/mom_vi_u_coriolis.f \ |
| 212 |
$(SOURCE_CODE)/mom_vi_u_grad_ke.f \ |
| 213 |
$(SOURCE_CODE)/mom_vi_u_vertshear.f \ |
| 214 |
$(SOURCE_CODE)/mom_vi_v_coriolis.f \ |
| 215 |
$(SOURCE_CODE)/mom_vi_v_grad_ke.f \ |
| 216 |
$(SOURCE_CODE)/mom_vi_v_vertshear.f \ |
| 217 |
\ |
| 218 |
$(SOURCE_CODE)/packages_init_variables.f \ |
| 219 |
$(SOURCE_CODE)/plot_field.f \ |
| 220 |
$(SOURCE_CODE)/solve_for_pressure.f \ |
| 221 |
$(SOURCE_CODE)/state_summary.f \ |
| 222 |
$(SOURCE_CODE)/timestep.f \ |
| 223 |
$(SOURCE_CODE)/the_correction_step.f \ |
| 224 |
$(SOURCE_CODE)/the_main_loop.f \ |
| 225 |
$(SOURCE_CODE)/thermodynamics.f \ |
| 226 |
$(SOURCE_CODE)/timestep_tracer.f \ |
| 227 |
$(SOURCE_CODE)/swfrac.f \ |
| 228 |
\ |
| 229 |
$(SOURCE_CODE)/kpp_calc.f \ |
| 230 |
$(SOURCE_CODE)/kpp_calc_diff.f \ |
| 231 |
$(SOURCE_CODE)/kpp_calc_visc.f \ |
| 232 |
$(SOURCE_CODE)/kpp_do_diags.f \ |
| 233 |
$(SOURCE_CODE)/kpp_init.f \ |
| 234 |
$(SOURCE_CODE)/kpp_open_diags.f \ |
| 235 |
$(SOURCE_CODE)/kpp_routines.f \ |
| 236 |
$(SOURCE_CODE)/kpp_transport_s.f \ |
| 237 |
$(SOURCE_CODE)/kpp_transport_t.f \ |
| 238 |
\ |
| 239 |
$(SOURCE_CODE)/gmredi_calc_diff.f \ |
| 240 |
$(SOURCE_CODE)/gmredi_calc_tensor.f \ |
| 241 |
$(SOURCE_CODE)/gmredi_calc_uvflow.f \ |
| 242 |
$(SOURCE_CODE)/gmredi_calc_wflow.f \ |
| 243 |
$(SOURCE_CODE)/gmredi_diags.f \ |
| 244 |
$(SOURCE_CODE)/gmredi_init.f \ |
| 245 |
$(SOURCE_CODE)/gmredi_rtransport.f \ |
| 246 |
$(SOURCE_CODE)/gmredi_slope_limit.f \ |
| 247 |
$(SOURCE_CODE)/gmredi_xtransport.f \ |
| 248 |
$(SOURCE_CODE)/gmredi_ytransport.f \ |
| 249 |
\ |
| 250 |
$(SOURCE_CODE)/ctrl_map_ini.f \ |
| 251 |
$(SOURCE_CODE)/ctrl_map_forcing.f \ |
| 252 |
\ |
| 253 |
$(SOURCE_CODE)/cost_final.f \ |
| 254 |
$(SOURCE_CODE)/cost_init.f \ |
| 255 |
$(SOURCE_CODE)/cost_tile.f \ |
| 256 |
$(SOURCE_CODE)/cost_test.f \ |
| 257 |
$(SOURCE_CODE)/cost_tracer.f \ |
| 258 |
$(SOURCE_CODE)/cost_atlantic_heat.f \ |
| 259 |
$(SOURCE_CODE)/cost_vector.f \ |
| 260 |
\ |
| 261 |
$(SOURCE_CODE)/shap_filt_apply_ts.f \ |
| 262 |
$(SOURCE_CODE)/shap_filt_apply_uv.f \ |
| 263 |
$(SOURCE_CODE)/shap_filt_tracer_s1.f \ |
| 264 |
$(SOURCE_CODE)/shap_filt_tracer_s2.f \ |
| 265 |
$(SOURCE_CODE)/shap_filt_tracer_s2g.f \ |
| 266 |
$(SOURCE_CODE)/shap_filt_tracer_s4.f \ |
| 267 |
$(SOURCE_CODE)/shap_filt_uv_s1.f \ |
| 268 |
$(SOURCE_CODE)/shap_filt_uv_s2.f \ |
| 269 |
$(SOURCE_CODE)/shap_filt_uv_s2g.f \ |
| 270 |
$(SOURCE_CODE)/shap_filt_uv_s2c.f \ |
| 271 |
$(SOURCE_CODE)/shap_filt_uv_s4.f \ |
| 272 |
|
| 273 |
\ |
| 274 |
# $(SOURCE_CODE)/ini_ep.f \ |
| 275 |
# $(SOURCE_CODE)/calc_ep_forcing.f \ |
| 276 |
# $(SOURCE_CODE)/cost_entropy.f \ |
| 277 |
# $(SOURCE_CODE)/cost_t_misfit.f \ |
| 278 |
# $(SOURCE_CODE)/cost_eflux_regul.f \ |
| 279 |
# \ |
| 280 |
|
| 281 |
|
| 282 |
#-------------------------------------------------------- |
| 283 |
# rules |
| 284 |
#-------------------------------------------------------- |
| 285 |
|
| 286 |
small_f: |
| 287 |
cd $(SOURCE_CODE); $(MAKE) depend; $(MAKE) small_f |
| 288 |
|
| 289 |
allcode: |
| 290 |
cd $(DEST) ; cat $(SRC_MODEL) >! tamc_code.f |
| 291 |
|
| 292 |
admodeltamc: |
| 293 |
cd $(DEST) ; $(TAMC) $(ADTAMCFLAG) tamc_code.f \ |
| 294 |
>! tamc_code_ad.prot |
| 295 |
|
| 296 |
admodeltaf: |
| 297 |
cd $(DEST) ; $(TAF) $(ADTAFFLAG) tamc_code.f |
| 298 |
|
| 299 |
ftlmodeltamc: |
| 300 |
cd $(DEST) ; $(TAMC) $(FTLTAMCFLAG) tamc_code.f \ |
| 301 |
>! tamc_code_ftl.prot |
| 302 |
|
| 303 |
ftlmodeltaf: |
| 304 |
cd $(DEST) ; $(TAF) $(FTLTAFFLAG) tamc_code.f |
| 305 |
|
| 306 |
svdmodeltaf: |
| 307 |
cd $(DEST) ; $(TAF) $(SVDTAFFLAG) tamc_code.f |
| 308 |
|
| 309 |
adchange: |
| 310 |
${ADJOINT_SCRIPT}/adjoint_sed.com \ |
| 311 |
>! tamc_code_sed_ad.f ; \ |
| 312 |
cp $(PKG)/autodiff/adjoint_model.F \ |
| 313 |
$(PKG)/autodiff/adjoint_model.F_old ; \ |
| 314 |
cat tamc_code_sed_ad.f >> $(PKG)/autodiff/adjoint_model.F |
| 315 |
|
| 316 |
ftlchange: |
| 317 |
cp $(PKG)/autodiff/tangentlinear_model.F \ |
| 318 |
$(PKG)/autodiff/tangentlinear_model.F_old ; \ |
| 319 |
cat tamc_code_ftl.f >> $(PKG)/autodiff/tangentlinear_model.F |
| 320 |
|
| 321 |
adrestore: |
| 322 |
cp $(PKG)/autodiff/adjoint_model.F_template \ |
| 323 |
$(PKG)/autodiff/adjoint_model.F |
| 324 |
|
| 325 |
ftlrestore: |
| 326 |
cp $(PKG)/autodiff/tangentlinear_model.F_template \ |
| 327 |
$(PKG)/autodiff/tangentlinear_model.F |
| 328 |
|
| 329 |
adtamc: adrestore ftlrestore small_f allcode admodeltamc |
| 330 |
|
| 331 |
adtaf: adrestore ftlrestore small_f allcode admodeltaf |
| 332 |
|
| 333 |
ftltamc: adrestore ftlrestore small_f allcode ftlmodeltamc |
| 334 |
|
| 335 |
ftltaf: adrestore ftlrestore small_f allcode ftlmodeltaf |
| 336 |
|
| 337 |
svdtaf: adrestore ftlrestore allcode svdmodeltaf |
| 338 |
|
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