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Updating to new gad_... mom_... routines.
Updated to code in c40pre8.
o New package pkg/rw/ needed new flow directives for TAMC. o Replacement of calc_mom_rhs by mom_fluxform and mom_vecinv needed update of adjoint/makefile and additional store directives in the_main_loop.F to cover all cases.
Updates to generate tangent linear code.
Extended list of code to be differentiated: o added routines related to diffkr, kapgm o added routines related to split into dynamics/thermodynamics.
Missing routine in SRC list added.
Added a flow directive file for ecco_check_exp.
Added S/R forward_step.F
Added more routines to be differentiated.
o Updated makefile to incorporate new routines and flow directives o Added "make adtaf" for usage of TAF instead of TAMC. o Bug fix in adjoint_ecco_sed.com o Removed some adjoint prototype code
Updated reference adjoint code and TAMC protocol for test case verification/vero/.
See doc/tag-index and doc/notes_c37_adj.txt Preparation for stand-alone autodifferentiability.
Modifications and additions to enable automatic differentiation. Detailed info's in doc/notes_c37_adj.txt
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