/[MITgcm]/MITgcm/adjoint/makefile
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Revision 1.9 - (hide annotations) (download)
Mon Aug 13 18:12:02 2001 UTC (22 years, 9 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint40pre7, checkpoint40pre6
Changes since 1.8: +7 -1 lines 
Extended list of code to be differentiated:
o added routines related to diffkr, kapgm
o added routines related to split into dynamics/thermodynamics.
1 heimbach 1.1 SHELL = /bin/tcsh
2     RM = rm -f
3     LOC = $(PWD)
4     TAMC = tamc
5 heimbach 1.4 TAF = ~fastopt/bin/taf
6 heimbach 1.1 DEST = .
7     SOURCE_CODE = ../bin
8     ADJOINT_SCRIPT = ../adjoint
9     BASE = ..
10 heimbach 1.4 TAMCFLAGS = -reverse -i4 -r4
11     TAFFLAGS = -reverse -i4 -r4
12 heimbach 1.1 PKG = $(BASE)/pkg
13    
14 heimbach 1.4 DIFF_FLAGS = -toplevel the_main_loop \
15 heimbach 1.1 -input ' xx_theta_dummy \
16     xx_salt_dummy \
17 heimbach 1.4 xx_tr1_dummy \
18 heimbach 1.1 xx_hflux_dummy \
19     xx_sflux_dummy \
20     xx_tauu_dummy \
21     xx_tauv_dummy \
22     xx_sss_dummy \
23 heimbach 1.9 xx_sst_dummy \
24     xx_diffkr_dummy \
25     xx_kapgm_dummy' \
26 heimbach 1.1 -output 'fc'
27    
28 heimbach 1.4 TAMCFLAG = $(TAMCFLAGS) $(DIFF_FLAGS) -admark ad
29    
30 heimbach 1.8 TAFFLAG = $(TAFFLAGS) $(DIFF_FLAGS) -admark ad
31 heimbach 1.1
32    
33     # Source files for the MITgcmUV
34 heimbach 1.4 SRC_MODEL = \
35     $(PKG)/autodiff/read_write.flow \
36 heimbach 1.1 $(PKG)/autodiff/read_write_fld.flow \
37     $(PKG)/autodiff/read_write_rec.flow \
38 heimbach 1.4 $(PKG)/autodiff/diags.flow \
39 heimbach 1.1 $(PKG)/autodiff/cg2d.flow \
40 heimbach 1.4 $(PKG)/autodiff/debug.flow \
41 heimbach 1.1 $(PKG)/autodiff/dummy_in_stepping.flow \
42     $(PKG)/autodiff/external_fields_load.flow \
43     $(PKG)/autodiff/eesupp.flow \
44     $(PKG)/autodiff/active_file.flow \
45     $(PKG)/autodiff/write_state.flow \
46 heimbach 1.7 $(PKG)/autodiff/ecco_check_exp.flow \
47 heimbach 1.1 $(PKG)/autodiff/exch_ad.flow \
48 heimbach 1.4 $(PKG)/autodiff/exch_z_ad.flow \
49     $(PKG)/autodiff/exch_uv_ad.flow \
50 heimbach 1.1 $(PKG)/autodiff/global_sum_ad.flow \
51     $(PKG)/autodiff/global_max_ad.flow \
52 heimbach 1.4 $(PKG)/autodiff/initialisation.flow \
53 heimbach 1.1 $(PKG)/autodiff/mdsio.flow \
54 heimbach 1.4 $(PKG)/autodiff/monitor.flow \
55 heimbach 1.1 $(PKG)/autodiff/checkpoint.flow \
56     $(PKG)/autodiff/print_message.flow \
57     $(PKG)/autodiff/open_copy_data_file.flow\
58 heimbach 1.2 $(PKG)/autodiff/timeave.flow \
59 heimbach 1.1 \
60     $(SOURCE_CODE)/calc_buoyancy.f \
61     $(SOURCE_CODE)/calc_common_factors.f \
62     $(SOURCE_CODE)/calc_diffusivity.f \
63     $(SOURCE_CODE)/calc_div_ghat.f \
64     $(SOURCE_CODE)/calc_grad_phi_surf.f \
65     $(SOURCE_CODE)/calc_gs.f \
66     $(SOURCE_CODE)/calc_gt.f \
67 heimbach 1.4 $(SOURCE_CODE)/calc_gtr1.f \
68 heimbach 1.1 $(SOURCE_CODE)/calc_ivdc.f \
69     $(SOURCE_CODE)/calc_mom_rhs.f \
70     $(SOURCE_CODE)/calc_phi_hyd.f \
71 heimbach 1.9 $(SOURCE_CODE)/calc_viscosity.f \
72 heimbach 1.1 $(SOURCE_CODE)/comm_stats.f \
73     $(SOURCE_CODE)/convect.f \
74     $(SOURCE_CODE)/convective_adjustment.f \
75 heimbach 1.2 $(SOURCE_CODE)/convective_adjustment_ini.f \
76 heimbach 1.1 $(SOURCE_CODE)/correction_step.f \
77     $(SOURCE_CODE)/cycle_tracer.f \
78     $(SOURCE_CODE)/different_multiple.f \
79     $(SOURCE_CODE)/do_fields_blocking_exchanges.f \
80     $(SOURCE_CODE)/do_the_model_io.f \
81     $(SOURCE_CODE)/dynamics.f \
82     $(SOURCE_CODE)/external_forcing.f \
83     $(SOURCE_CODE)/external_forcing_surf.f \
84     $(SOURCE_CODE)/find_alpha.f \
85     $(SOURCE_CODE)/find_rho.f \
86 heimbach 1.6 $(SOURCE_CODE)/forward_step.f \
87 heimbach 1.1 $(SOURCE_CODE)/freeze.f \
88     $(SOURCE_CODE)/get_offline_fields.f \
89 heimbach 1.4 $(SOURCE_CODE)/gad_biharm_x.f \
90     $(SOURCE_CODE)/gad_biharm_y.f \
91     $(SOURCE_CODE)/gad_c2_adv_r.f \
92     $(SOURCE_CODE)/gad_c2_adv_x.f \
93     $(SOURCE_CODE)/gad_c2_adv_y.f \
94     $(SOURCE_CODE)/gad_c4_adv_r.f \
95     $(SOURCE_CODE)/gad_c4_adv_x.f \
96     $(SOURCE_CODE)/gad_c4_adv_y.f \
97     $(SOURCE_CODE)/gad_calc_rhs.f \
98     $(SOURCE_CODE)/gad_del2.f \
99     $(SOURCE_CODE)/gad_diff_r.f \
100     $(SOURCE_CODE)/gad_diff_x.f \
101     $(SOURCE_CODE)/gad_diff_y.f \
102     $(SOURCE_CODE)/gad_fluxlimit_adv_r.f \
103     $(SOURCE_CODE)/gad_fluxlimit_adv_x.f \
104     $(SOURCE_CODE)/gad_fluxlimit_adv_y.f \
105     $(SOURCE_CODE)/gad_grad_x.f \
106     $(SOURCE_CODE)/gad_grad_y.f \
107 heimbach 1.5 $(SOURCE_CODE)/gad_u3_adv_r.f \
108     $(SOURCE_CODE)/gad_u3_adv_x.f \
109     $(SOURCE_CODE)/gad_u3_adv_y.f \
110 heimbach 1.4 $(SOURCE_CODE)/grad_sigma.f \
111 heimbach 1.1 $(SOURCE_CODE)/impldiff.f \
112     $(SOURCE_CODE)/ini_cartesian_grid.f \
113     $(SOURCE_CODE)/ini_cg2d.f \
114     $(SOURCE_CODE)/ini_communication_patterns.f \
115     $(SOURCE_CODE)/ini_cori.f \
116 heimbach 1.4 $(SOURCE_CODE)/ini_curvilinear_grid.f \
117 heimbach 1.1 $(SOURCE_CODE)/ini_depths.f \
118     $(SOURCE_CODE)/ini_fields.f \
119     $(SOURCE_CODE)/ini_forcing.f \
120     $(SOURCE_CODE)/ini_grid.f \
121 heimbach 1.8 $(SOURCE_CODE)/ini_linear_phisurf.f \
122 heimbach 1.1 $(SOURCE_CODE)/ini_masks_etc.f \
123 heimbach 1.9 $(SOURCE_CODE)/ini_mixing.f \
124 heimbach 1.5 $(SOURCE_CODE)/ini_p_ground.f \
125 heimbach 1.4 $(SOURCE_CODE)/ini_pnh.f \
126 heimbach 1.1 $(SOURCE_CODE)/ini_procs.f \
127     $(SOURCE_CODE)/ini_psurf.f \
128     $(SOURCE_CODE)/ini_salt.f \
129     $(SOURCE_CODE)/ini_spherical_polar_grid.f \
130     $(SOURCE_CODE)/ini_theta.f \
131 heimbach 1.4 $(SOURCE_CODE)/ini_tr1.f \
132     $(SOURCE_CODE)/ini_dynvars.f \
133     $(SOURCE_CODE)/ini_vel.f \
134 heimbach 1.1 $(SOURCE_CODE)/ini_vertical_grid.f \
135     $(SOURCE_CODE)/initialise_varia.f \
136     $(SOURCE_CODE)/integrate_for_w.f \
137     $(SOURCE_CODE)/modeldata_example.f \
138 heimbach 1.4 $(SOURCE_CODE)/mom_calc_hfacz.f \
139     $(SOURCE_CODE)/mom_calc_ke.f \
140     $(SOURCE_CODE)/mom_cdscheme.f \
141     $(SOURCE_CODE)/mom_u_adv_uu.f \
142     $(SOURCE_CODE)/mom_u_adv_vu.f \
143     $(SOURCE_CODE)/mom_u_adv_wu.f \
144     $(SOURCE_CODE)/mom_u_bottomdrag.f \
145     $(SOURCE_CODE)/mom_u_del2u.f \
146     $(SOURCE_CODE)/mom_u_metric_nh.f \
147     $(SOURCE_CODE)/mom_u_metric_sphere.f \
148     $(SOURCE_CODE)/mom_u_rviscflux.f \
149     $(SOURCE_CODE)/mom_u_sidedrag.f \
150     $(SOURCE_CODE)/mom_u_xviscflux.f \
151     $(SOURCE_CODE)/mom_u_yviscflux.f \
152     $(SOURCE_CODE)/mom_v_adv_uv.f \
153     $(SOURCE_CODE)/mom_v_adv_vv.f \
154     $(SOURCE_CODE)/mom_v_adv_wv.f \
155     $(SOURCE_CODE)/mom_v_bottomdrag.f \
156     $(SOURCE_CODE)/mom_v_del2v.f \
157     $(SOURCE_CODE)/mom_v_metric_nh.f \
158     $(SOURCE_CODE)/mom_v_metric_sphere.f \
159     $(SOURCE_CODE)/mom_v_rviscflux.f \
160     $(SOURCE_CODE)/mom_v_sidedrag.f \
161     $(SOURCE_CODE)/mom_v_xviscflux.f \
162     $(SOURCE_CODE)/mom_v_yviscflux.f \
163 heimbach 1.1 $(SOURCE_CODE)/packages_init_variables.f \
164     $(SOURCE_CODE)/plot_field.f \
165     $(SOURCE_CODE)/solve_for_pressure.f \
166     $(SOURCE_CODE)/state_summary.f \
167     $(SOURCE_CODE)/timestep.f \
168     $(SOURCE_CODE)/the_correction_step.f \
169 heimbach 1.2 $(SOURCE_CODE)/the_main_loop.f \
170 heimbach 1.9 $(SOURCE_CODE)/thermodynamics.f \
171 heimbach 1.1 $(SOURCE_CODE)/timestep_tracer.f \
172     $(SOURCE_CODE)/swfrac.f \
173     \
174     $(SOURCE_CODE)/kpp_calc.f \
175     $(SOURCE_CODE)/kpp_calc_diff.f \
176 heimbach 1.9 $(SOURCE_CODE)/kpp_calc_visc.f \
177 heimbach 1.1 $(SOURCE_CODE)/kpp_do_diags.f \
178     $(SOURCE_CODE)/kpp_init.f \
179     $(SOURCE_CODE)/kpp_open_diags.f \
180     $(SOURCE_CODE)/kpp_routines.f \
181     $(SOURCE_CODE)/kpp_transport_s.f \
182     $(SOURCE_CODE)/kpp_transport_t.f \
183     \
184     $(SOURCE_CODE)/gmredi_calc_diff.f \
185     $(SOURCE_CODE)/gmredi_calc_tensor.f \
186     $(SOURCE_CODE)/gmredi_diags.f \
187     $(SOURCE_CODE)/gmredi_init.f \
188     $(SOURCE_CODE)/gmredi_rtransport.f \
189     $(SOURCE_CODE)/gmredi_slope_limit.f \
190     $(SOURCE_CODE)/gmredi_xtransport.f \
191     $(SOURCE_CODE)/gmredi_ytransport.f \
192     \
193     $(SOURCE_CODE)/ctrl_map_ini.f \
194     $(SOURCE_CODE)/ctrl_map_forcing.f \
195     \
196     $(SOURCE_CODE)/cost_final.f \
197     $(SOURCE_CODE)/cost_init.f \
198 heimbach 1.4 $(SOURCE_CODE)/cost_tile.f \
199 heimbach 1.1 $(SOURCE_CODE)/cost_test.f \
200 heimbach 1.4 $(SOURCE_CODE)/cost_tracer.f \
201 heimbach 1.1 \
202    
203    
204     #--------------------------------------------------------
205     # rules
206     #--------------------------------------------------------
207    
208     adcode:
209     cd $(DEST) ; cat $(SRC_MODEL) >! tamc_code_ecco.f
210 heimbach 1.4 admodeltamc:
211 heimbach 1.1 cd $(DEST) ; $(TAMC) $(TAMCFLAG) tamc_code_ecco.f \
212 heimbach 1.3 >! tamc_code_ecco_ad.prot
213 heimbach 1.1
214 heimbach 1.4 admodeltaf:
215     cd $(DEST) ; $(TAF) $(TAFFLAG) tamc_code_ecco.f
216    
217 heimbach 1.1 adchange:
218     ${ADJOINT_SCRIPT}/adjoint_ecco_sed.com \
219     >! tamc_code_ecco_sed_ad.f ; \
220     cp $(PKG)/autodiff/adjoint_model.F \
221     $(PKG)/autodiff/adjoint_model.F_old ; \
222     cat tamc_code_ecco_sed_ad.f >> $(PKG)/autodiff/adjoint_model.F
223     adrestore:
224     cp $(PKG)/autodiff/adjoint_model.F_template \
225     $(PKG)/autodiff/adjoint_model.F
226 heimbach 1.4
227     adtamc: adcode admodeltamc
228    
229     adtaf: adcode admodeltaf
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