/[MITgcm]/MITgcm/adjoint/makefile
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Annotation of /MITgcm/adjoint/makefile

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Revision 1.26 - (hide annotations) (download)
Fri Jan 10 23:41:14 2003 UTC (21 years, 4 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint47i_post, checkpoint47h_post
Changes since 1.25: +26 -24 lines
o few modif.'s to get latest version adjointed
  (mainly kick out code in ini_linear_phisurf)
o modif's to run adjoint with exactConserv
o case GM_BOLUS_ADVEC should be cleaned
  S/R gmredi_slope_psi should be cleaned
o verification/carbon now has exactConserv=.TRUE.

1 heimbach 1.1 SHELL = /bin/tcsh
2     RM = rm -f
3     LOC = $(PWD)
4     TAMC = tamc
5 heimbach 1.21 ###TAMC = /data43/ralf/tamc/tamc
6 heimbach 1.26 ###TAF = taf
7     TAF = ~fastopt/bin/taf
8 heimbach 1.1 DEST = .
9     SOURCE_CODE = ../bin
10     ADJOINT_SCRIPT = ../adjoint
11     BASE = ..
12 heimbach 1.16 PKG = $(BASE)/pkg
13 heimbach 1.20 #
14     ADTAMCFLAGS = -reverse -admark ad -i4 -r4
15     ADTAFFLAGS = -reverse -admark ad -i4 -r4 \
16     -flow taf_flow.log -nonew_arg
17     FTLTAMCFLAGS = -forward -ftlmark g_ -i4 -r4
18     FTLTAFFLAGS = -forward -ftlmark g_ -i4 -r4 \
19     -flow taf_flow.log -nonew_arg
20     SVDTAMCFLAGS = -reverse -forward -pure -i4 -r4
21     SVDTAFFLAGS = -reverse -forward -pure -i4 -r4 \
22     -flow taf_flow.log -nonew_arg
23     #
24 heimbach 1.16 # -warn_step -flow taf_flow.log
25 heimbach 1.1
26 heimbach 1.4 DIFF_FLAGS = -toplevel the_main_loop \
27 heimbach 1.1 -input ' xx_theta_dummy \
28     xx_salt_dummy \
29 heimbach 1.4 xx_tr1_dummy \
30 heimbach 1.1 xx_hflux_dummy \
31     xx_sflux_dummy \
32     xx_tauu_dummy \
33     xx_tauv_dummy \
34 heimbach 1.23 xx_sst_dummy \
35 heimbach 1.1 xx_sss_dummy \
36 heimbach 1.9 xx_diffkr_dummy \
37 heimbach 1.23 xx_kapgm_dummy \
38     xx_efluxy_dummy \
39     xx_efluxp_dummy' \
40 heimbach 1.1 -output 'fc'
41 heimbach 1.20 #
42     # -output 'objf_vector'
43     # -output 'fc'
44 heimbach 1.1
45 heimbach 1.10 ADTAMCFLAG = $(ADTAMCFLAGS) $(DIFF_FLAGS)
46     ADTAFFLAG = $(ADTAFFLAGS) $(DIFF_FLAGS)
47 heimbach 1.1
48 heimbach 1.20 FTLTAMCFLAG = $(FTLTAMCFLAGS) $(DIFF_FLAGS)
49     FTLTAFFLAG = $(FTLTAFFLAGS) $(DIFF_FLAGS)
50    
51     SVDTAMCFLAG = $(SVDTAMCFLAGS) $(DIFF_FLAGS)
52     SVDTAFFLAG = $(SVDTAFFLAGS) $(DIFF_FLAGS)
53 heimbach 1.1
54     # Source files for the MITgcmUV
55 heimbach 1.4 SRC_MODEL = \
56     $(PKG)/autodiff/read_write.flow \
57 heimbach 1.1 $(PKG)/autodiff/read_write_fld.flow \
58     $(PKG)/autodiff/read_write_rec.flow \
59 heimbach 1.4 $(PKG)/autodiff/diags.flow \
60 heimbach 1.1 $(PKG)/autodiff/cg2d.flow \
61 heimbach 1.4 $(PKG)/autodiff/debug.flow \
62 heimbach 1.23 $(PKG)/autodiff/do_the_model_io.flow \
63 heimbach 1.1 $(PKG)/autodiff/dummy_in_stepping.flow \
64     $(PKG)/autodiff/eesupp.flow \
65     $(PKG)/autodiff/active_file.flow \
66     $(PKG)/autodiff/write_state.flow \
67 heimbach 1.7 $(PKG)/autodiff/ecco_check_exp.flow \
68 heimbach 1.1 $(PKG)/autodiff/exch_ad.flow \
69 heimbach 1.4 $(PKG)/autodiff/exch_z_ad.flow \
70     $(PKG)/autodiff/exch_uv_ad.flow \
71 heimbach 1.1 $(PKG)/autodiff/global_sum_ad.flow \
72     $(PKG)/autodiff/global_max_ad.flow \
73 heimbach 1.4 $(PKG)/autodiff/initialisation.flow \
74 heimbach 1.1 $(PKG)/autodiff/mdsio.flow \
75 heimbach 1.4 $(PKG)/autodiff/monitor.flow \
76 heimbach 1.1 $(PKG)/autodiff/checkpoint.flow \
77     $(PKG)/autodiff/print_message.flow \
78     $(PKG)/autodiff/open_copy_data_file.flow\
79 heimbach 1.2 $(PKG)/autodiff/timeave.flow \
80 heimbach 1.1 \
81 heimbach 1.15 $(SOURCE_CODE)/adams_bashforth2.f \
82 heimbach 1.1 $(SOURCE_CODE)/calc_buoyancy.f \
83     $(SOURCE_CODE)/calc_common_factors.f \
84     $(SOURCE_CODE)/calc_diffusivity.f \
85     $(SOURCE_CODE)/calc_div_ghat.f \
86     $(SOURCE_CODE)/calc_grad_phi_surf.f \
87     $(SOURCE_CODE)/calc_gs.f \
88     $(SOURCE_CODE)/calc_gt.f \
89 heimbach 1.4 $(SOURCE_CODE)/calc_gtr1.f \
90 heimbach 1.1 $(SOURCE_CODE)/calc_ivdc.f \
91     $(SOURCE_CODE)/calc_phi_hyd.f \
92 heimbach 1.9 $(SOURCE_CODE)/calc_viscosity.f \
93 heimbach 1.1 $(SOURCE_CODE)/comm_stats.f \
94     $(SOURCE_CODE)/convect.f \
95     $(SOURCE_CODE)/convective_adjustment.f \
96 heimbach 1.2 $(SOURCE_CODE)/convective_adjustment_ini.f \
97 heimbach 1.22 $(SOURCE_CODE)/convective_weights.f \
98     $(SOURCE_CODE)/convectively_mixtracer.f \
99 heimbach 1.1 $(SOURCE_CODE)/correction_step.f \
100     $(SOURCE_CODE)/cycle_tracer.f \
101     $(SOURCE_CODE)/different_multiple.f \
102     $(SOURCE_CODE)/do_fields_blocking_exchanges.f \
103 heimbach 1.25 $(SOURCE_CODE)/do_stagger_fields_exchanges.f \
104 heimbach 1.1 $(SOURCE_CODE)/dynamics.f \
105 heimbach 1.24 $(SOURCE_CODE)/external_fields_load.f \
106 heimbach 1.1 $(SOURCE_CODE)/external_forcing.f \
107     $(SOURCE_CODE)/external_forcing_surf.f \
108     $(SOURCE_CODE)/find_alpha.f \
109     $(SOURCE_CODE)/find_rho.f \
110 heimbach 1.6 $(SOURCE_CODE)/forward_step.f \
111 heimbach 1.1 $(SOURCE_CODE)/freeze.f \
112 heimbach 1.16 \
113 heimbach 1.13 $(SOURCE_CODE)/gad_advection.f \
114 heimbach 1.4 $(SOURCE_CODE)/gad_biharm_x.f \
115     $(SOURCE_CODE)/gad_biharm_y.f \
116     $(SOURCE_CODE)/gad_c2_adv_r.f \
117     $(SOURCE_CODE)/gad_c2_adv_x.f \
118     $(SOURCE_CODE)/gad_c2_adv_y.f \
119     $(SOURCE_CODE)/gad_c4_adv_r.f \
120     $(SOURCE_CODE)/gad_c4_adv_x.f \
121     $(SOURCE_CODE)/gad_c4_adv_y.f \
122     $(SOURCE_CODE)/gad_calc_rhs.f \
123     $(SOURCE_CODE)/gad_del2.f \
124     $(SOURCE_CODE)/gad_diff_r.f \
125     $(SOURCE_CODE)/gad_diff_x.f \
126     $(SOURCE_CODE)/gad_diff_y.f \
127 heimbach 1.12 $(SOURCE_CODE)/gad_dst3_adv_x.f \
128     $(SOURCE_CODE)/gad_dst3_adv_y.f \
129 heimbach 1.13 $(SOURCE_CODE)/gad_dst3_adv_r.f \
130 heimbach 1.12 $(SOURCE_CODE)/gad_dst3fl_adv_x.f \
131     $(SOURCE_CODE)/gad_dst3fl_adv_y.f \
132 heimbach 1.13 $(SOURCE_CODE)/gad_dst3fl_adv_r.f \
133 heimbach 1.4 $(SOURCE_CODE)/gad_fluxlimit_adv_r.f \
134     $(SOURCE_CODE)/gad_fluxlimit_adv_x.f \
135     $(SOURCE_CODE)/gad_fluxlimit_adv_y.f \
136     $(SOURCE_CODE)/gad_grad_x.f \
137     $(SOURCE_CODE)/gad_grad_y.f \
138 heimbach 1.5 $(SOURCE_CODE)/gad_u3_adv_r.f \
139     $(SOURCE_CODE)/gad_u3_adv_x.f \
140     $(SOURCE_CODE)/gad_u3_adv_y.f \
141 heimbach 1.16 \
142 heimbach 1.4 $(SOURCE_CODE)/grad_sigma.f \
143 heimbach 1.1 $(SOURCE_CODE)/impldiff.f \
144 heimbach 1.17 $(SOURCE_CODE)/ini_autodiff.f \
145 heimbach 1.1 $(SOURCE_CODE)/ini_cartesian_grid.f \
146     $(SOURCE_CODE)/ini_cg2d.f \
147     $(SOURCE_CODE)/ini_communication_patterns.f \
148     $(SOURCE_CODE)/ini_cori.f \
149 heimbach 1.4 $(SOURCE_CODE)/ini_curvilinear_grid.f \
150 heimbach 1.1 $(SOURCE_CODE)/ini_depths.f \
151     $(SOURCE_CODE)/ini_fields.f \
152     $(SOURCE_CODE)/ini_forcing.f \
153     $(SOURCE_CODE)/ini_grid.f \
154 heimbach 1.8 $(SOURCE_CODE)/ini_linear_phisurf.f \
155 heimbach 1.1 $(SOURCE_CODE)/ini_masks_etc.f \
156 heimbach 1.9 $(SOURCE_CODE)/ini_mixing.f \
157 heimbach 1.5 $(SOURCE_CODE)/ini_p_ground.f \
158 heimbach 1.25 $(SOURCE_CODE)/ini_pressure.f \
159 heimbach 1.4 $(SOURCE_CODE)/ini_pnh.f \
160 heimbach 1.1 $(SOURCE_CODE)/ini_psurf.f \
161     $(SOURCE_CODE)/ini_salt.f \
162     $(SOURCE_CODE)/ini_spherical_polar_grid.f \
163     $(SOURCE_CODE)/ini_theta.f \
164 heimbach 1.4 $(SOURCE_CODE)/ini_tr1.f \
165     $(SOURCE_CODE)/ini_dynvars.f \
166     $(SOURCE_CODE)/ini_vel.f \
167 heimbach 1.1 $(SOURCE_CODE)/ini_vertical_grid.f \
168     $(SOURCE_CODE)/initialise_varia.f \
169     $(SOURCE_CODE)/integrate_for_w.f \
170 heimbach 1.25 $(SOURCE_CODE)/integr_continuity.f \
171 heimbach 1.1 $(SOURCE_CODE)/modeldata_example.f \
172 heimbach 1.16 \
173 heimbach 1.11 $(SOURCE_CODE)/mom_fluxform.f \
174 heimbach 1.13 $(SOURCE_CODE)/mom_hdissip.f \
175 heimbach 1.11 $(SOURCE_CODE)/mom_vecinv.f \
176 heimbach 1.4 $(SOURCE_CODE)/mom_calc_hfacz.f \
177     $(SOURCE_CODE)/mom_calc_ke.f \
178 heimbach 1.13 $(SOURCE_CODE)/mom_calc_strain.f \
179     $(SOURCE_CODE)/mom_calc_tension.f \
180 heimbach 1.4 $(SOURCE_CODE)/mom_cdscheme.f \
181     $(SOURCE_CODE)/mom_u_adv_uu.f \
182     $(SOURCE_CODE)/mom_u_adv_vu.f \
183     $(SOURCE_CODE)/mom_u_adv_wu.f \
184     $(SOURCE_CODE)/mom_u_bottomdrag.f \
185 heimbach 1.17 $(SOURCE_CODE)/mom_u_coriolis.f \
186 heimbach 1.25 $(SOURCE_CODE)/mom_u_coriolis_nh.f \
187 heimbach 1.4 $(SOURCE_CODE)/mom_u_del2u.f \
188     $(SOURCE_CODE)/mom_u_metric_nh.f \
189     $(SOURCE_CODE)/mom_u_metric_sphere.f \
190     $(SOURCE_CODE)/mom_u_rviscflux.f \
191     $(SOURCE_CODE)/mom_u_sidedrag.f \
192     $(SOURCE_CODE)/mom_u_xviscflux.f \
193     $(SOURCE_CODE)/mom_u_yviscflux.f \
194     $(SOURCE_CODE)/mom_v_adv_uv.f \
195     $(SOURCE_CODE)/mom_v_adv_vv.f \
196     $(SOURCE_CODE)/mom_v_adv_wv.f \
197     $(SOURCE_CODE)/mom_v_bottomdrag.f \
198 heimbach 1.17 $(SOURCE_CODE)/mom_v_coriolis.f \
199 heimbach 1.4 $(SOURCE_CODE)/mom_v_del2v.f \
200     $(SOURCE_CODE)/mom_v_metric_nh.f \
201     $(SOURCE_CODE)/mom_v_metric_sphere.f \
202     $(SOURCE_CODE)/mom_v_rviscflux.f \
203     $(SOURCE_CODE)/mom_v_sidedrag.f \
204     $(SOURCE_CODE)/mom_v_xviscflux.f \
205     $(SOURCE_CODE)/mom_v_yviscflux.f \
206 heimbach 1.11 $(SOURCE_CODE)/mom_vi_calc_absvort3.f \
207     $(SOURCE_CODE)/mom_vi_calc_hdiv.f \
208     $(SOURCE_CODE)/mom_vi_calc_ke.f \
209     $(SOURCE_CODE)/mom_vi_calc_relvort3.f \
210     $(SOURCE_CODE)/mom_vi_coriolis.f \
211     $(SOURCE_CODE)/mom_vi_del2uv.f \
212     $(SOURCE_CODE)/mom_vi_hdissip.f \
213     $(SOURCE_CODE)/mom_vi_u_coriolis.f \
214     $(SOURCE_CODE)/mom_vi_u_grad_ke.f \
215     $(SOURCE_CODE)/mom_vi_u_vertshear.f \
216     $(SOURCE_CODE)/mom_vi_v_coriolis.f \
217     $(SOURCE_CODE)/mom_vi_v_grad_ke.f \
218     $(SOURCE_CODE)/mom_vi_v_vertshear.f \
219 heimbach 1.16 \
220 heimbach 1.1 $(SOURCE_CODE)/packages_init_variables.f \
221     $(SOURCE_CODE)/plot_field.f \
222 heimbach 1.25 $(SOURCE_CODE)/quasihydrostaticterms.f \
223 heimbach 1.1 $(SOURCE_CODE)/solve_for_pressure.f \
224     $(SOURCE_CODE)/state_summary.f \
225 heimbach 1.25 $(SOURCE_CODE)/store_pressure.f \
226 heimbach 1.1 $(SOURCE_CODE)/timestep.f \
227     $(SOURCE_CODE)/the_correction_step.f \
228 heimbach 1.2 $(SOURCE_CODE)/the_main_loop.f \
229 heimbach 1.9 $(SOURCE_CODE)/thermodynamics.f \
230 heimbach 1.1 $(SOURCE_CODE)/timestep_tracer.f \
231 heimbach 1.26 $(SOURCE_CODE)/update_etah.f \
232 heimbach 1.1 $(SOURCE_CODE)/swfrac.f \
233     \
234     $(SOURCE_CODE)/gmredi_calc_diff.f \
235 heimbach 1.25 $(SOURCE_CODE)/gmredi_calc_psi_b.f \
236 heimbach 1.1 $(SOURCE_CODE)/gmredi_calc_tensor.f \
237 heimbach 1.22 $(SOURCE_CODE)/gmredi_calc_uvflow.f \
238     $(SOURCE_CODE)/gmredi_calc_wflow.f \
239 heimbach 1.1 $(SOURCE_CODE)/gmredi_diags.f \
240     $(SOURCE_CODE)/gmredi_init.f \
241     $(SOURCE_CODE)/gmredi_rtransport.f \
242     $(SOURCE_CODE)/gmredi_slope_limit.f \
243 heimbach 1.25 $(SOURCE_CODE)/gmredi_slope_psi.f \
244 heimbach 1.1 $(SOURCE_CODE)/gmredi_xtransport.f \
245     $(SOURCE_CODE)/gmredi_ytransport.f \
246     \
247     $(SOURCE_CODE)/ctrl_map_ini.f \
248     $(SOURCE_CODE)/ctrl_map_forcing.f \
249     \
250     $(SOURCE_CODE)/cost_final.f \
251     $(SOURCE_CODE)/cost_init.f \
252 heimbach 1.4 $(SOURCE_CODE)/cost_tile.f \
253 heimbach 1.1 $(SOURCE_CODE)/cost_test.f \
254 heimbach 1.4 $(SOURCE_CODE)/cost_tracer.f \
255 heimbach 1.20 $(SOURCE_CODE)/cost_atlantic_heat.f \
256     $(SOURCE_CODE)/cost_vector.f \
257 heimbach 1.17 \
258 heimbach 1.23
259 heimbach 1.26 # $(SOURCE_CODE)/kpp_calc.f \
260     # $(SOURCE_CODE)/kpp_calc_diff.f \
261     # $(SOURCE_CODE)/kpp_calc_visc.f \
262     # $(SOURCE_CODE)/kpp_do_diags.f \
263     # $(SOURCE_CODE)/kpp_init.f \
264     # $(SOURCE_CODE)/kpp_open_diags.f \
265     # $(SOURCE_CODE)/kpp_routines.f \
266     # $(SOURCE_CODE)/kpp_transport_s.f \
267     # $(SOURCE_CODE)/kpp_transport_t.f \
268     # \
269     # $(SOURCE_CODE)/shap_filt_apply_ts.f \
270     # $(SOURCE_CODE)/shap_filt_apply_uv.f \
271     # $(SOURCE_CODE)/shap_filt_tracer_s1.f \
272     # $(SOURCE_CODE)/shap_filt_tracer_s2.f \
273     # $(SOURCE_CODE)/shap_filt_tracer_s2g.f \
274     # $(SOURCE_CODE)/shap_filt_tracer_s4.f \
275     # $(SOURCE_CODE)/shap_filt_uv_s1.f \
276     # $(SOURCE_CODE)/shap_filt_uv_s2.f \
277     # $(SOURCE_CODE)/shap_filt_uv_s2g.f \
278     # $(SOURCE_CODE)/shap_filt_uv_s2c.f \
279     # $(SOURCE_CODE)/shap_filt_uv_s4.f \
280    
281     # \
282 heimbach 1.23 # $(SOURCE_CODE)/ini_ep.f \
283 heimbach 1.20 # $(SOURCE_CODE)/calc_ep_forcing.f \
284     # $(SOURCE_CODE)/cost_entropy.f \
285 heimbach 1.23 # $(SOURCE_CODE)/cost_t_misfit.f \
286     # $(SOURCE_CODE)/cost_eflux_regul.f \
287     # \
288 heimbach 1.20
289 heimbach 1.1
290     #--------------------------------------------------------
291     # rules
292     #--------------------------------------------------------
293    
294 heimbach 1.23 small_f:
295     cd $(SOURCE_CODE); $(MAKE) depend; $(MAKE) small_f
296    
297 heimbach 1.10 allcode:
298 heimbach 1.20 cd $(DEST) ; cat $(SRC_MODEL) >! tamc_code.f
299 heimbach 1.10
300 heimbach 1.4 admodeltamc:
301 heimbach 1.20 cd $(DEST) ; $(TAMC) $(ADTAMCFLAG) tamc_code.f \
302     >! tamc_code_ad.prot
303 heimbach 1.1
304 heimbach 1.4 admodeltaf:
305 heimbach 1.20 cd $(DEST) ; $(TAF) $(ADTAFFLAG) tamc_code.f
306 heimbach 1.10
307 heimbach 1.20 ftlmodeltamc:
308     cd $(DEST) ; $(TAMC) $(FTLTAMCFLAG) tamc_code.f \
309     >! tamc_code_ftl.prot
310 heimbach 1.10
311 heimbach 1.20 ftlmodeltaf:
312     cd $(DEST) ; $(TAF) $(FTLTAFFLAG) tamc_code.f
313    
314     svdmodeltaf:
315     cd $(DEST) ; $(TAF) $(SVDTAFFLAG) tamc_code.f
316 heimbach 1.4
317 heimbach 1.1 adchange:
318 heimbach 1.24 cp $(PKG)/autodiff/adjoint_model.F_template \
319     $(PKG)/autodiff/adjoint_model.F ; \
320     ${ADJOINT_SCRIPT}/adjoint_sed.com \
321     >! tamc_code_sed_ad.f ; \
322 heimbach 1.1 cp $(PKG)/autodiff/adjoint_model.F \
323     $(PKG)/autodiff/adjoint_model.F_old ; \
324 heimbach 1.20 cat tamc_code_sed_ad.f >> $(PKG)/autodiff/adjoint_model.F
325    
326     ftlchange:
327 heimbach 1.24 cp $(PKG)/autodiff/tangentlinear_model.F_template \
328     $(PKG)/autodiff/tangentlinear_model.F ; \
329 heimbach 1.20 cp $(PKG)/autodiff/tangentlinear_model.F \
330 heimbach 1.24 $(PKG)/autodiff/tangentlinear_model.F_old ; \
331 heimbach 1.20 cat tamc_code_ftl.f >> $(PKG)/autodiff/tangentlinear_model.F
332    
333 heimbach 1.1 adrestore:
334     cp $(PKG)/autodiff/adjoint_model.F_template \
335     $(PKG)/autodiff/adjoint_model.F
336 heimbach 1.4
337 heimbach 1.20 ftlrestore:
338     cp $(PKG)/autodiff/tangentlinear_model.F_template \
339     $(PKG)/autodiff/tangentlinear_model.F
340    
341 heimbach 1.23 adtamc: adrestore ftlrestore small_f allcode admodeltamc
342 heimbach 1.20
343 heimbach 1.23 adtaf: adrestore ftlrestore small_f allcode admodeltaf
344 heimbach 1.20
345 heimbach 1.23 ftltamc: adrestore ftlrestore small_f allcode ftlmodeltamc
346 heimbach 1.10
347 heimbach 1.23 ftltaf: adrestore ftlrestore small_f allcode ftlmodeltaf
348 heimbach 1.10
349 heimbach 1.20 svdtaf: adrestore ftlrestore allcode svdmodeltaf
350 heimbach 1.4

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