/[MITgcm]/MITgcm/adjoint/makefile
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Annotation of /MITgcm/adjoint/makefile

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Revision 1.20 - (hide annotations) (download)
Thu Jan 17 16:55:25 2002 UTC (22 years, 4 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint44b_post, chkpt44a_pre, checkpoint44, chkpt44a_post, checkpoint44b_pre, chkpt44c_pre, chkpt44c_post
Changes since 1.19: +59 -22 lines
* Updated adjoint/makefile
  o removed "_ecco" from names
  o added/modified forward mode options
  o added dependent vector option
  o tried SVD matrix computation (doesn't work;
    too much memory use by TAF)
* Updated flow directives related to FTL
* removed global_sum__g.F (not necessary)
* initialise forward mode anomalies in ctrl_unpack.F
  (so far "crude" initialization only).
* Added flag ALLOW_TANGENTLINEAR_RUN complememting
  ALLOW_ADJOINT_RUN
* driver routine the_model_main.F needs separate call
  to FTL routine G_THE_MAIN_LOOP with parameter list
  identical to THE_MAIN_LOOP (TAF doesn't remove arguments).
* added template file tangentlinear_model.F
  for forward mode.

1 heimbach 1.1 SHELL = /bin/tcsh
2     RM = rm -f
3     LOC = $(PWD)
4     TAMC = tamc
5 heimbach 1.4 TAF = ~fastopt/bin/taf
6 heimbach 1.1 DEST = .
7     SOURCE_CODE = ../bin
8     ADJOINT_SCRIPT = ../adjoint
9     BASE = ..
10 heimbach 1.16 PKG = $(BASE)/pkg
11 heimbach 1.20 #
12     ADTAMCFLAGS = -reverse -admark ad -i4 -r4
13     ADTAFFLAGS = -reverse -admark ad -i4 -r4 \
14     -flow taf_flow.log -nonew_arg
15     FTLTAMCFLAGS = -forward -ftlmark g_ -i4 -r4
16     FTLTAFFLAGS = -forward -ftlmark g_ -i4 -r4 \
17     -flow taf_flow.log -nonew_arg
18     SVDTAMCFLAGS = -reverse -forward -pure -i4 -r4
19     SVDTAFFLAGS = -reverse -forward -pure -i4 -r4 \
20     -flow taf_flow.log -nonew_arg
21     #
22 heimbach 1.16 # -warn_step -flow taf_flow.log
23 heimbach 1.1
24 heimbach 1.4 DIFF_FLAGS = -toplevel the_main_loop \
25 heimbach 1.1 -input ' xx_theta_dummy \
26     xx_salt_dummy \
27 heimbach 1.4 xx_tr1_dummy \
28 heimbach 1.1 xx_hflux_dummy \
29     xx_sflux_dummy \
30     xx_tauu_dummy \
31     xx_tauv_dummy \
32     xx_sss_dummy \
33 heimbach 1.9 xx_sst_dummy \
34     xx_diffkr_dummy \
35     xx_kapgm_dummy' \
36 heimbach 1.1 -output 'fc'
37 heimbach 1.20 #
38     # -output 'objf_vector'
39     # -output 'fc'
40 heimbach 1.1
41 heimbach 1.10 ADTAMCFLAG = $(ADTAMCFLAGS) $(DIFF_FLAGS)
42     ADTAFFLAG = $(ADTAFFLAGS) $(DIFF_FLAGS)
43 heimbach 1.1
44 heimbach 1.20 FTLTAMCFLAG = $(FTLTAMCFLAGS) $(DIFF_FLAGS)
45     FTLTAFFLAG = $(FTLTAFFLAGS) $(DIFF_FLAGS)
46    
47     SVDTAMCFLAG = $(SVDTAMCFLAGS) $(DIFF_FLAGS)
48     SVDTAFFLAG = $(SVDTAFFLAGS) $(DIFF_FLAGS)
49 heimbach 1.1
50     # Source files for the MITgcmUV
51 heimbach 1.4 SRC_MODEL = \
52     $(PKG)/autodiff/read_write.flow \
53 heimbach 1.1 $(PKG)/autodiff/read_write_fld.flow \
54     $(PKG)/autodiff/read_write_rec.flow \
55 heimbach 1.4 $(PKG)/autodiff/diags.flow \
56 heimbach 1.1 $(PKG)/autodiff/cg2d.flow \
57 heimbach 1.4 $(PKG)/autodiff/debug.flow \
58 heimbach 1.1 $(PKG)/autodiff/dummy_in_stepping.flow \
59     $(PKG)/autodiff/external_fields_load.flow \
60     $(PKG)/autodiff/eesupp.flow \
61     $(PKG)/autodiff/active_file.flow \
62     $(PKG)/autodiff/write_state.flow \
63 heimbach 1.7 $(PKG)/autodiff/ecco_check_exp.flow \
64 heimbach 1.1 $(PKG)/autodiff/exch_ad.flow \
65 heimbach 1.4 $(PKG)/autodiff/exch_z_ad.flow \
66     $(PKG)/autodiff/exch_uv_ad.flow \
67 heimbach 1.1 $(PKG)/autodiff/global_sum_ad.flow \
68     $(PKG)/autodiff/global_max_ad.flow \
69 heimbach 1.4 $(PKG)/autodiff/initialisation.flow \
70 heimbach 1.1 $(PKG)/autodiff/mdsio.flow \
71 heimbach 1.4 $(PKG)/autodiff/monitor.flow \
72 heimbach 1.1 $(PKG)/autodiff/checkpoint.flow \
73     $(PKG)/autodiff/print_message.flow \
74     $(PKG)/autodiff/open_copy_data_file.flow\
75 heimbach 1.2 $(PKG)/autodiff/timeave.flow \
76 heimbach 1.1 \
77 heimbach 1.15 $(SOURCE_CODE)/adams_bashforth2.f \
78 heimbach 1.1 $(SOURCE_CODE)/calc_buoyancy.f \
79     $(SOURCE_CODE)/calc_common_factors.f \
80     $(SOURCE_CODE)/calc_diffusivity.f \
81     $(SOURCE_CODE)/calc_div_ghat.f \
82 heimbach 1.17 $(SOURCE_CODE)/calc_exact_eta.f \
83 heimbach 1.1 $(SOURCE_CODE)/calc_grad_phi_surf.f \
84     $(SOURCE_CODE)/calc_gs.f \
85     $(SOURCE_CODE)/calc_gt.f \
86 heimbach 1.4 $(SOURCE_CODE)/calc_gtr1.f \
87 heimbach 1.1 $(SOURCE_CODE)/calc_ivdc.f \
88     $(SOURCE_CODE)/calc_phi_hyd.f \
89 heimbach 1.9 $(SOURCE_CODE)/calc_viscosity.f \
90 heimbach 1.1 $(SOURCE_CODE)/comm_stats.f \
91     $(SOURCE_CODE)/convect.f \
92     $(SOURCE_CODE)/convective_adjustment.f \
93 heimbach 1.2 $(SOURCE_CODE)/convective_adjustment_ini.f \
94 heimbach 1.1 $(SOURCE_CODE)/correction_step.f \
95     $(SOURCE_CODE)/cycle_tracer.f \
96     $(SOURCE_CODE)/different_multiple.f \
97     $(SOURCE_CODE)/do_fields_blocking_exchanges.f \
98     $(SOURCE_CODE)/do_the_model_io.f \
99     $(SOURCE_CODE)/dynamics.f \
100     $(SOURCE_CODE)/external_forcing.f \
101     $(SOURCE_CODE)/external_forcing_surf.f \
102     $(SOURCE_CODE)/find_alpha.f \
103     $(SOURCE_CODE)/find_rho.f \
104 heimbach 1.6 $(SOURCE_CODE)/forward_step.f \
105 heimbach 1.1 $(SOURCE_CODE)/freeze.f \
106 heimbach 1.16 \
107 heimbach 1.13 $(SOURCE_CODE)/gad_advection.f \
108 heimbach 1.4 $(SOURCE_CODE)/gad_biharm_x.f \
109     $(SOURCE_CODE)/gad_biharm_y.f \
110     $(SOURCE_CODE)/gad_c2_adv_r.f \
111     $(SOURCE_CODE)/gad_c2_adv_x.f \
112     $(SOURCE_CODE)/gad_c2_adv_y.f \
113     $(SOURCE_CODE)/gad_c4_adv_r.f \
114     $(SOURCE_CODE)/gad_c4_adv_x.f \
115     $(SOURCE_CODE)/gad_c4_adv_y.f \
116     $(SOURCE_CODE)/gad_calc_rhs.f \
117     $(SOURCE_CODE)/gad_del2.f \
118     $(SOURCE_CODE)/gad_diff_r.f \
119     $(SOURCE_CODE)/gad_diff_x.f \
120     $(SOURCE_CODE)/gad_diff_y.f \
121 heimbach 1.12 $(SOURCE_CODE)/gad_dst3_adv_x.f \
122     $(SOURCE_CODE)/gad_dst3_adv_y.f \
123 heimbach 1.13 $(SOURCE_CODE)/gad_dst3_adv_r.f \
124 heimbach 1.12 $(SOURCE_CODE)/gad_dst3fl_adv_x.f \
125     $(SOURCE_CODE)/gad_dst3fl_adv_y.f \
126 heimbach 1.13 $(SOURCE_CODE)/gad_dst3fl_adv_r.f \
127 heimbach 1.4 $(SOURCE_CODE)/gad_fluxlimit_adv_r.f \
128     $(SOURCE_CODE)/gad_fluxlimit_adv_x.f \
129     $(SOURCE_CODE)/gad_fluxlimit_adv_y.f \
130     $(SOURCE_CODE)/gad_grad_x.f \
131     $(SOURCE_CODE)/gad_grad_y.f \
132 heimbach 1.5 $(SOURCE_CODE)/gad_u3_adv_r.f \
133     $(SOURCE_CODE)/gad_u3_adv_x.f \
134     $(SOURCE_CODE)/gad_u3_adv_y.f \
135 heimbach 1.16 \
136 heimbach 1.4 $(SOURCE_CODE)/grad_sigma.f \
137 heimbach 1.1 $(SOURCE_CODE)/impldiff.f \
138 heimbach 1.17 $(SOURCE_CODE)/ini_autodiff.f \
139 heimbach 1.1 $(SOURCE_CODE)/ini_cartesian_grid.f \
140     $(SOURCE_CODE)/ini_cg2d.f \
141     $(SOURCE_CODE)/ini_communication_patterns.f \
142     $(SOURCE_CODE)/ini_cori.f \
143 heimbach 1.4 $(SOURCE_CODE)/ini_curvilinear_grid.f \
144 heimbach 1.1 $(SOURCE_CODE)/ini_depths.f \
145     $(SOURCE_CODE)/ini_fields.f \
146     $(SOURCE_CODE)/ini_forcing.f \
147     $(SOURCE_CODE)/ini_grid.f \
148 heimbach 1.8 $(SOURCE_CODE)/ini_linear_phisurf.f \
149 heimbach 1.1 $(SOURCE_CODE)/ini_masks_etc.f \
150 heimbach 1.9 $(SOURCE_CODE)/ini_mixing.f \
151 heimbach 1.5 $(SOURCE_CODE)/ini_p_ground.f \
152 heimbach 1.4 $(SOURCE_CODE)/ini_pnh.f \
153 heimbach 1.1 $(SOURCE_CODE)/ini_psurf.f \
154     $(SOURCE_CODE)/ini_salt.f \
155     $(SOURCE_CODE)/ini_spherical_polar_grid.f \
156     $(SOURCE_CODE)/ini_theta.f \
157 heimbach 1.4 $(SOURCE_CODE)/ini_tr1.f \
158     $(SOURCE_CODE)/ini_dynvars.f \
159     $(SOURCE_CODE)/ini_vel.f \
160 heimbach 1.1 $(SOURCE_CODE)/ini_vertical_grid.f \
161     $(SOURCE_CODE)/initialise_varia.f \
162     $(SOURCE_CODE)/integrate_for_w.f \
163     $(SOURCE_CODE)/modeldata_example.f \
164 heimbach 1.16 \
165 heimbach 1.11 $(SOURCE_CODE)/mom_fluxform.f \
166 heimbach 1.13 $(SOURCE_CODE)/mom_hdissip.f \
167 heimbach 1.11 $(SOURCE_CODE)/mom_vecinv.f \
168 heimbach 1.4 $(SOURCE_CODE)/mom_calc_hfacz.f \
169     $(SOURCE_CODE)/mom_calc_ke.f \
170 heimbach 1.13 $(SOURCE_CODE)/mom_calc_strain.f \
171     $(SOURCE_CODE)/mom_calc_tension.f \
172 heimbach 1.4 $(SOURCE_CODE)/mom_cdscheme.f \
173     $(SOURCE_CODE)/mom_u_adv_uu.f \
174     $(SOURCE_CODE)/mom_u_adv_vu.f \
175     $(SOURCE_CODE)/mom_u_adv_wu.f \
176     $(SOURCE_CODE)/mom_u_bottomdrag.f \
177 heimbach 1.17 $(SOURCE_CODE)/mom_u_coriolis.f \
178 heimbach 1.4 $(SOURCE_CODE)/mom_u_del2u.f \
179     $(SOURCE_CODE)/mom_u_metric_nh.f \
180     $(SOURCE_CODE)/mom_u_metric_sphere.f \
181     $(SOURCE_CODE)/mom_u_rviscflux.f \
182     $(SOURCE_CODE)/mom_u_sidedrag.f \
183     $(SOURCE_CODE)/mom_u_xviscflux.f \
184     $(SOURCE_CODE)/mom_u_yviscflux.f \
185     $(SOURCE_CODE)/mom_v_adv_uv.f \
186     $(SOURCE_CODE)/mom_v_adv_vv.f \
187     $(SOURCE_CODE)/mom_v_adv_wv.f \
188     $(SOURCE_CODE)/mom_v_bottomdrag.f \
189 heimbach 1.17 $(SOURCE_CODE)/mom_v_coriolis.f \
190 heimbach 1.4 $(SOURCE_CODE)/mom_v_del2v.f \
191     $(SOURCE_CODE)/mom_v_metric_nh.f \
192     $(SOURCE_CODE)/mom_v_metric_sphere.f \
193     $(SOURCE_CODE)/mom_v_rviscflux.f \
194     $(SOURCE_CODE)/mom_v_sidedrag.f \
195     $(SOURCE_CODE)/mom_v_xviscflux.f \
196     $(SOURCE_CODE)/mom_v_yviscflux.f \
197 heimbach 1.11 $(SOURCE_CODE)/mom_vi_calc_absvort3.f \
198     $(SOURCE_CODE)/mom_vi_calc_hdiv.f \
199     $(SOURCE_CODE)/mom_vi_calc_ke.f \
200     $(SOURCE_CODE)/mom_vi_calc_relvort3.f \
201     $(SOURCE_CODE)/mom_vi_coriolis.f \
202     $(SOURCE_CODE)/mom_vi_del2uv.f \
203     $(SOURCE_CODE)/mom_vi_hdissip.f \
204     $(SOURCE_CODE)/mom_vi_u_coriolis.f \
205     $(SOURCE_CODE)/mom_vi_u_grad_ke.f \
206     $(SOURCE_CODE)/mom_vi_u_vertshear.f \
207     $(SOURCE_CODE)/mom_vi_v_coriolis.f \
208     $(SOURCE_CODE)/mom_vi_v_grad_ke.f \
209     $(SOURCE_CODE)/mom_vi_v_vertshear.f \
210 heimbach 1.16 \
211 heimbach 1.1 $(SOURCE_CODE)/packages_init_variables.f \
212     $(SOURCE_CODE)/plot_field.f \
213     $(SOURCE_CODE)/solve_for_pressure.f \
214     $(SOURCE_CODE)/state_summary.f \
215     $(SOURCE_CODE)/timestep.f \
216     $(SOURCE_CODE)/the_correction_step.f \
217 heimbach 1.2 $(SOURCE_CODE)/the_main_loop.f \
218 heimbach 1.9 $(SOURCE_CODE)/thermodynamics.f \
219 heimbach 1.1 $(SOURCE_CODE)/timestep_tracer.f \
220     $(SOURCE_CODE)/swfrac.f \
221     \
222     $(SOURCE_CODE)/kpp_calc.f \
223     $(SOURCE_CODE)/kpp_calc_diff.f \
224 heimbach 1.9 $(SOURCE_CODE)/kpp_calc_visc.f \
225 heimbach 1.1 $(SOURCE_CODE)/kpp_do_diags.f \
226     $(SOURCE_CODE)/kpp_init.f \
227     $(SOURCE_CODE)/kpp_open_diags.f \
228     $(SOURCE_CODE)/kpp_routines.f \
229     $(SOURCE_CODE)/kpp_transport_s.f \
230     $(SOURCE_CODE)/kpp_transport_t.f \
231     \
232     $(SOURCE_CODE)/gmredi_calc_diff.f \
233     $(SOURCE_CODE)/gmredi_calc_tensor.f \
234     $(SOURCE_CODE)/gmredi_diags.f \
235     $(SOURCE_CODE)/gmredi_init.f \
236     $(SOURCE_CODE)/gmredi_rtransport.f \
237     $(SOURCE_CODE)/gmredi_slope_limit.f \
238     $(SOURCE_CODE)/gmredi_xtransport.f \
239     $(SOURCE_CODE)/gmredi_ytransport.f \
240     \
241     $(SOURCE_CODE)/ctrl_map_ini.f \
242     $(SOURCE_CODE)/ctrl_map_forcing.f \
243     \
244     $(SOURCE_CODE)/cost_final.f \
245     $(SOURCE_CODE)/cost_init.f \
246 heimbach 1.4 $(SOURCE_CODE)/cost_tile.f \
247 heimbach 1.1 $(SOURCE_CODE)/cost_test.f \
248 heimbach 1.4 $(SOURCE_CODE)/cost_tracer.f \
249 heimbach 1.20 $(SOURCE_CODE)/cost_atlantic_heat.f \
250     $(SOURCE_CODE)/cost_vector.f \
251 heimbach 1.17 \
252     $(SOURCE_CODE)/shap_filt_apply_ts.f \
253 heimbach 1.20 $(SOURCE_CODE)/shap_filt_apply_uv.f \
254 heimbach 1.17 $(SOURCE_CODE)/shap_filt_tracer_s1.f \
255     $(SOURCE_CODE)/shap_filt_tracer_s2.f \
256     $(SOURCE_CODE)/shap_filt_tracer_s2g.f \
257     $(SOURCE_CODE)/shap_filt_tracer_s4.f \
258     $(SOURCE_CODE)/shap_filt_uv_s1.f \
259     $(SOURCE_CODE)/shap_filt_uv_s2.f \
260     $(SOURCE_CODE)/shap_filt_uv_s2g.f \
261     $(SOURCE_CODE)/shap_filt_uv_s4.f \
262 heimbach 1.1 \
263    
264 heimbach 1.20 # $(SOURCE_CODE)/calc_ep_forcing.f \
265     # $(SOURCE_CODE)/cost_entropy.f \
266     # $(SOURCE_CODE)/ini_ep.f \
267     \
268    
269 heimbach 1.1
270     #--------------------------------------------------------
271     # rules
272     #--------------------------------------------------------
273    
274 heimbach 1.10 allcode:
275 heimbach 1.20 cd $(DEST) ; cat $(SRC_MODEL) >! tamc_code.f
276 heimbach 1.10
277 heimbach 1.4 admodeltamc:
278 heimbach 1.20 cd $(DEST) ; $(TAMC) $(ADTAMCFLAG) tamc_code.f \
279     >! tamc_code_ad.prot
280 heimbach 1.1
281 heimbach 1.4 admodeltaf:
282 heimbach 1.20 cd $(DEST) ; $(TAF) $(ADTAFFLAG) tamc_code.f
283 heimbach 1.10
284 heimbach 1.20 ftlmodeltamc:
285     cd $(DEST) ; $(TAMC) $(FTLTAMCFLAG) tamc_code.f \
286     >! tamc_code_ftl.prot
287 heimbach 1.10
288 heimbach 1.20 ftlmodeltaf:
289     cd $(DEST) ; $(TAF) $(FTLTAFFLAG) tamc_code.f
290    
291     svdmodeltaf:
292     cd $(DEST) ; $(TAF) $(SVDTAFFLAG) tamc_code.f
293 heimbach 1.4
294 heimbach 1.1 adchange:
295 heimbach 1.20 ${ADJOINT_SCRIPT}/adjoint_sed.com \
296     >! tamc_code_sed_ad.f ; \
297 heimbach 1.1 cp $(PKG)/autodiff/adjoint_model.F \
298     $(PKG)/autodiff/adjoint_model.F_old ; \
299 heimbach 1.20 cat tamc_code_sed_ad.f >> $(PKG)/autodiff/adjoint_model.F
300    
301     ftlchange:
302     cp $(PKG)/autodiff/tangentlinear_model.F \
303     $(PKG)/autodiff/tangentlinear_model.F_old ; \
304     cat tamc_code_ftl.f >> $(PKG)/autodiff/tangentlinear_model.F
305    
306 heimbach 1.1 adrestore:
307     cp $(PKG)/autodiff/adjoint_model.F_template \
308     $(PKG)/autodiff/adjoint_model.F
309 heimbach 1.4
310 heimbach 1.20 ftlrestore:
311     cp $(PKG)/autodiff/tangentlinear_model.F_template \
312     $(PKG)/autodiff/tangentlinear_model.F
313    
314     adtamc: adrestore ftlrestore allcode admodeltamc
315    
316     adtaf: adrestore ftlrestore allcode admodeltaf
317    
318     ftltamc: adrestore ftlrestore allcode ftlmodeltamc
319 heimbach 1.10
320 heimbach 1.20 ftltaf: adrestore ftlrestore allcode ftlmodeltaf
321 heimbach 1.10
322 heimbach 1.20 svdtaf: adrestore ftlrestore allcode svdmodeltaf
323 heimbach 1.4

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